RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 C1orf220Q5T0J3 134 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 SPINK14Q6IE38 97 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 CXCL17Q6UXB2 119 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 TAS2R42Q7RTR8 314 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 TRPM8Q7Z2W7 1104 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 NANOGNBQ7Z5D8 188 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ZBED8Q8IZ13 594 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ATP6V0D2Q8N8Y2 350 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 NECAB1Q8N987 351 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 MFSD9Q8NBP5 474 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 OR5D13Q8NGL4 314 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 NEIL2Q969S2 332 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ANKRD9Q96BM1 317 aaPredicted RBP2.26□□□□□ -2.05
HDAC6-212ENST00000461608 HAVCR1Q96D42 359 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 VSIG2Q96IQ7 327 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 MS4A14Q96JA4 679 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 B3GALT6Q96L58 329 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 NPY6RQ99463 290 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 TCHPQ9BT92 498 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 SELENOIQ9C0D9 397 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 NMUR2Q9GZQ4 415 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 POPDC2Q9HBU9 364 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 RAB18Q9NP72 206 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 FANCFQ9NPI8 374 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 TNFRSF19Q9NS68 423 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 BFARQ9NZS9 450 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ONECUT1Q9UBC0 465 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 SEC14L3Q9UDX4 400 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ADAM28Q9UKQ2 775 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 ANGPTL2Q9UKU9 493 aa2.26□□□□□ -2.05
HDAC6-212ENST00000461608 PRPF19Q9UMS4 504 aaKnown RBP2.26□□□□□ -2.05
HDAC6-212ENST00000461608 RPL36Q9Y3U8 105 aaKnown RBP2.26□□□□□ -2.05
HDAC6-212ENST00000461608 RPAP1Q9BWH6 1393 aaPredicted RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 SH3TC1Q8TE82 1336 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 A0A1W2PQ72 361 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 OR52A4PA6NMU1 304 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC169A6NNP5 214 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 HIP1O00291 1037 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 FCN1O00602 326 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 NBR2O15453 112 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 FCMRO60667 390 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 RAMP3O60896 148 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 SRSF10O75494 262 aaKnown RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 DIRAS1O95057 198 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 NDUFB10O96000 172 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 IL1BP01584 269 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ALOX5P09917 674 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 NCF2P19878 526 aaPredicted RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 MX1P20591 662 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 PSMB1P20618 241 aaKnown RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 CMA1P23946 247 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 GCAP28676 217 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 HTR1FP30939 366 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 DUSP3P51452 185 aaPredicted RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 PKNOX1P55347 436 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF45Q02386 682 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 TLE4Q04727 773 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 BCL2L1Q07817 233 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF239Q16600 458 aaKnown RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ISXQ2M1V0 245 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 SAMD4BQ5PRF9 694 aaKnown RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 PHYHD1Q5SRE7 291 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 OR4F3Q6IEY1 312 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 C11orf71Q6IPW1 123 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 H2BFWTQ7Z2G1 175 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF100Q8IYN0 542 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 SLC38A6Q8IZM9 456 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 CCDC71LQ8N9Z2 235 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 CXorf40BQ96DE9 158 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 IFT74Q96LB3 600 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 HIST1H4GQ99525 98 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 RIOK1Q9BRS2 568 aaKnown RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 CHIAQ9BZP6 476 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ZDHHC11Q9H8X9 412 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF702PQ9H963 129 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 TMEM9Q9P0T7 183 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 BTNL2Q9UIR0 455 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 PTBP2Q9UKA9 531 aaKnown RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 TP53TG3Q9ULZ0 132 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 ERVW-1Q9UQF0 538 aa2.25□□□□□ -2.05
HDAC6-212ENST00000461608 TP53BP1Q12888 1972 aaPredicted RBP2.25□□□□□ -2.05
HDAC6-212ENST00000461608 CLSPNQ9HAW4 1339 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 KLF18A0A0U1RQI7 1052 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 IQANK1A0A1B0GTG1 560 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 EPOPA6NHQ4 379 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 TRIM64CA6NLI5 447 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 A8MXQ7 604 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 UBXN8O00124 270 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF264O43296 627 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 TIMM8AO60220 97 aaPredicted RBP2.24□□□□□ -2.05
HDAC6-212ENST00000461608 UGT1A9O60656 530 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 PFKFB2O60825 505 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 ZNF254O75437 659 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 SNX4O95219 450 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 LYPD3O95274 346 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 IGHDP01880 384 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 P0C879 139 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 SLC2A3P11169 496 aa2.24□□□□□ -2.05
HDAC6-212ENST00000461608 CCR1P32246 355 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms