RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 GABPB1Q06547 395 aaPredicted RBP15.13■□□□□ 0.01
TOP3A-202ENST00000461127 C2orf80Q0P641 193 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 FOXF1Q12946 379 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 XKR7Q5GH72 579 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 SPDYAQ5MJ70 313 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 GALNT5Q7Z7M9 940 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 ANKS4BQ8N8V4 417 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 CEP70Q8NHQ1 597 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.13■□□□□ 0.01
TOP3A-202ENST00000461127 STON2Q8WXE9 905 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 PPP3R2Q96LZ3 170 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 C3orf30Q96M34 536 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 FOXN4Q96NZ1 517 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 OR52B2Q96RD2 323 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 CCDC28BQ9BUN5 200 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 GLIPR2Q9H4G4 154 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 UBQLN4Q9NRR5 601 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 METRNQ9UJH8 293 aa15.13■□□□□ 0.01
TOP3A-202ENST00000461127 ARFGEF3Q5TH69 2177 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 CCT8L1PA6NM43 557 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 C9JVG2 144 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 PRIM2P49643 509 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 GALNTL6Q49A17 601 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 ATP6AP1LQ52LC2 224 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 GALNT18Q6P9A2 607 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 UBE2J2Q8N2K1 259 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 ATP6V1C2Q8NEY4 427 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 ZNF775Q96BV0 537 aaPredicted RBP15.12■□□□□ 0.01
TOP3A-202ENST00000461127 AMDHD1Q96NU7 426 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 EBPLQ9BY08 206 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 ACPTQ9BZG2 426 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 COQ10BQ9H8M1 238 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 AKTIPQ9H8T0 292 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 TAS2R7Q9NYW3 318 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 NTMQ9P121 344 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 TRIM33Q9UPN9 1127 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 SLC25A15Q9Y619 301 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 TGP01266 2768 aa15.12■□□□□ 0.01
TOP3A-202ENST00000461127 ZNF724A8MTY0 619 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 E9PBE3 544 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 PEX11AO75192 247 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 SEC22BO75396 215 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 RSL1D1O76021 490 aaKnown RBP15.11■□□□□ 0.01
TOP3A-202ENST00000461127 NKX2-2O95096 273 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 IFI6P09912 130 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 PRPS2P11908 318 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 LBPP18428 481 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 LCN1P31025 176 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 ZNF763Q0D2J5 394 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 LSM12Q3MHD2 195 aaKnown RBP15.11■□□□□ 0.01
TOP3A-202ENST00000461127 OR2T11Q8NH01 316 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 FBXO27Q8NI29 283 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 FBXO17Q96EF6 278 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 APIPQ96GX9 242 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 MAELQ96JY0 434 aaKnown RBP15.11■□□□□ 0.01
TOP3A-202ENST00000461127 C1orf109Q9NX04 203 aa15.11■□□□□ 0.01
TOP3A-202ENST00000461127 GPC6Q9Y625 555 aaPredicted RBP15.11■□□□□ 0.01
TOP3A-202ENST00000461127 A0A1W2PQD3 144 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 CYTIPO60759 359 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 NCF2P19878 526 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 PCMT1P22061 227 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 COMPP49747 757 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 SNRPD2P62316 118 aaKnown RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 PHC1P78364 1004 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 MAD2L1Q13257 205 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 SCGB2A2Q13296 93 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 FBXW9Q5XUX1 488 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 OR7E24Q6IFN5 339 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 CDRT4Q8N9R6 151 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 FNDC5Q8NAU1 212 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 GCDHQ92947 438 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 SORCS2Q96PQ0 1159 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 ZNF300Q96RE9 604 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 BPESC1Q9GZL8 116 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 EMC3Q9P0I2 261 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 GIMAP2Q9UG22 337 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 ING1Q9UK53 422 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-202ENST00000461127 CCL27Q9Y4X3 112 aa15.1■□□□□ 0.01
TOP3A-202ENST00000461127 A0A1W2PR80 420 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 LSM1O15116 133 aaKnown RBP15.09■□□□□ 0.01
TOP3A-202ENST00000461127 UBDO15205 165 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 EFNA2O43921 213 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 DCTN3O75935 186 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 PRPH2P23942 346 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 EDNRAP25101 427 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 MAPK1P28482 360 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 GPC1P35052 558 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 RPL38P63173 70 aaKnown RBP15.09■□□□□ 0.01
TOP3A-202ENST00000461127 SELENBP1Q13228 472 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 MLC1Q15049 377 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 C6orf136Q5SQH8 315 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 METTL21CQ5VZV1 264 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 SPATA19Q7Z5L4 167 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 LINC01356Q8N9X3 169 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 PHOSPHO1Q8TCT1 267 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 VRK1Q99986 396 aaPredicted RBP15.09■□□□□ 0.01
TOP3A-202ENST00000461127 KLHDC3Q9BQ90 382 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 ASB6Q9NWX5 421 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 TAS2R16Q9NYV7 291 aa15.09■□□□□ 0.01
TOP3A-202ENST00000461127 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms