RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 ADAMDEC1O15204 470 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SHOX2O60902 331 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 BCAS1O75363 584 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SYNGR4O95473 234 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NTN1O95631 604 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FCGR2AP12318 317 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DNASE1P24855 282 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SLC7A1P30825 629 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DNAJA1P31689 397 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PCGF2P35227 344 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SFTPDP35247 375 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 EIF1AXP47813 144 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 MAP2K6P52564 334 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ART1P52961 327 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DAZAP2Q15038 168 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 VMACQ2NL98 169 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RABL3Q5HYI8 236 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GTF2IRD2BQ6EKJ0 949 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 POMZP3Q6PJE2 187 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DHRS4L2Q6PKH6 230 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 HACD2Q6Y1H2 254 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 LUZP2Q86TE4 346 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GTF2IRD2Q86UP8 949 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ARMC8Q8IUR7 673 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SLC25A43Q8WUT9 341 aaPredicted RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RASSF5Q8WWW0 418 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 REXO5Q96IC2 774 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 KLHL15Q96M94 604 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NPAS1Q99742 590 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PIF1Q9H611 641 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TMEM185BQ9H7F4 350 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 JKAMPQ9P055 326 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CLCF1Q9UBD9 225 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NDRG3Q9UGV2 375 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PACSIN3Q9UKS6 424 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 MCTS1Q9ULC4 181 aaKnown RBP11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZNF175Q9Y473 711 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PDZD2O15018 2839 aa11.88□□□□□ -0.51
RAB11FIP3-207ENST00000461009 A0A0J9YW62 118 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 M0QX08 132 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TNFSF11O14788 317 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 EFNA2O43921 213 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 IFNA14P01570 189 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OPN1LWP04000 364 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GKN3PP0CG01 181 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TFPIP10646 304 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 AQP1P29972 269 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SLC1A3P43003 542 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 NUDT2P50583 147 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GZMMP51124 257 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 MNAT1P51948 309 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 POLR2HP52434 150 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PCBP3P57721 371 aaKnown RBP11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 VEZF1Q14119 521 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 WBP2NLQ6ICG8 309 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GGNQ86UU5 652 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CALHM3Q86XJ0 350 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CNEP1R1Q8N9A8 125 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CCDC197Q8NCU1 140 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OR10D3Q8NH80 312 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OSTF1Q92882 214 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZNF583Q96ND8 569 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 RPS6KB2Q9UBS0 482 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CHRNA9Q9UGM1 479 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CSMD1Q96PZ7 3565 aa11.87□□□□□ -0.51
RAB11FIP3-207ENST00000461009 H0YC42 278 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 AP3D1O14617 1153 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 MSTNO14793 375 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CXCL13O43927 109 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 SMNDC1O75940 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 MFN2O95140 757 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 C8BP07358 591 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 IL11P20809 199 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CXCR1P25024 350 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TACR3P29371 465 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ACAA2P42765 397 aaKnown RBP11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 FOXF2Q12947 444 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PON3Q15166 354 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TESK1Q15569 626 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 PPP4R4Q6NUP7 873 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CCDC80Q76M96 950 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 GCNT2Q8N0V5 402 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CADM2Q8N3J6 435 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OR2T12Q8NG77 320 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 LINC01560Q8TB33 94 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CPNE4Q96A23 557 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZNF524Q96C55 264 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DDIT4LQ96D03 193 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ZNF845Q96IR2 970 aaPredicted RBP11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ADGRG7Q96K78 797 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 DACH2Q96NX9 599 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 OR5B2Q96R09 309 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ADAM19Q9H013 955 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 CTPS2Q9NRF8 586 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TAGLN3Q9UI15 199 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 ST6GALNAC2Q9UJ37 374 aa11.86□□□□□ -0.51
RAB11FIP3-207ENST00000461009 TMED7-TICAM2A0A0A6YYA0 188 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms