RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 POC1BQ8TC44 478 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 WDR60Q8WVS4 1066 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 WNT2BQ93097 391 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 ZC3HAV1LQ96H79 300 aaKnown RBP13.17□□□□□ -0.3
NCK1-202ENST00000460960 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 WFDC6Q9BQY6 131 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 BCL2L10Q9HD36 194 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 SDHAF3Q9NRP4 125 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 ZNF226Q9NYT6 803 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 TAS2R10Q9NYW0 307 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 VDAC3Q9Y277 283 aa13.17□□□□□ -0.3
NCK1-202ENST00000460960 ZNF443Q9Y2A4 671 aaPredicted RBP13.17□□□□□ -0.3
NCK1-202ENST00000460960 A0A0G2JPF8 293 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 A8MXE2 369 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 HNRNPCL2B2RXH8 293 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 HNRNPCL3B7ZW38 293 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 C5orf58C9J3I9 102 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 SIAH2O43255 324 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 ZNF264O43296 627 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 FRS3O43559 492 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 HNRNPCL1O60812 293 aaKnown RBP13.16□□□□□ -0.3
NCK1-202ENST00000460960 OPN1SWP03999 348 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 HNRNPCL4P0DMR1 293 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 PRG2P13727 222 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 NID1P14543 1247 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 HK1P19367 917 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 IL11P20809 199 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 PCGF2P35227 344 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 STARP49675 285 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 GFRA1P56159 465 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 DSCR4P56555 118 aaPredicted RBP13.16□□□□□ -0.3
NCK1-202ENST00000460960 PSME3P61289 254 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 EEF1A1P68104 462 aaKnown RBP13.16□□□□□ -0.3
NCK1-202ENST00000460960 DMTNQ08495 405 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 KRT72Q14CN4 511 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 TMEM44Q2T9K0 475 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 PLPPR5Q32ZL2 321 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 MTERF4Q7Z6M4 381 aaKnown RBP13.16□□□□□ -0.3
NCK1-202ENST00000460960 IFNEQ86WN2 208 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 TMCO5AQ8N6Q1 288 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 C11orf65Q8NCR3 313 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 BBS10Q8TAM1 723 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 GPR119Q8TDV5 335 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 ECSITQ9BQ95 431 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 MED17Q9NVC6 651 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 THUMPD1Q9NXG2 353 aaKnown RBP13.16□□□□□ -0.3
NCK1-202ENST00000460960 CALML5Q9NZT1 146 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 GPC6Q9Y625 555 aaPredicted RBP13.16□□□□□ -0.3
NCK1-202ENST00000460960 COL6A5A8TX70 2615 aa13.16□□□□□ -0.3
NCK1-202ENST00000460960 A0A1W2PNV4 684 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 DEFB108AA8MXU0 73 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 H0YC42 278 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 H3BNH8 94 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 EFNA2O43921 213 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 CNOT4O95628 575 aaKnown RBP13.15□□□□□ -0.3
NCK1-202ENST00000460960 DBIP07108 87 aaKnown RBP13.15□□□□□ -0.3
NCK1-202ENST00000460960 LINGO3P0C6S8 592 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 GKN3PP0CG01 181 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 CPN1P15169 458 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 IL7RP16871 459 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 KCNJ5P48544 419 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 GSK3BP49841 420 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 CCR4P51679 360 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 TPD52P55327 224 aaPredicted RBP13.15□□□□□ -0.3
NCK1-202ENST00000460960 HOXC5Q00444 222 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 LIPEQ05469 1076 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 FOXF1Q12946 379 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 VMACQ2NL98 169 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 PRAMEF8Q5VWM4 474 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 PRAMEF7Q5VXH5 474 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 EIF3MQ7L2H7 374 aaKnown RBP13.15□□□□□ -0.3
NCK1-202ENST00000460960 CHMP1BQ7LBR1 199 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 ZNF550Q7Z398 422 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 MISPQ8IVT2 679 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 PEX5LQ8IYB4 626 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 RNF148Q8N7C7 305 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 HIPK4Q8NE63 616 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 TAMM41Q96BW9 452 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 SFXN2Q96NB2 322 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 LAT2Q9GZY6 243 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
NCK1-202ENST00000460960 CLCF1Q9UBD9 225 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 ABCD2Q9UBJ2 740 aa13.15□□□□□ -0.3
NCK1-202ENST00000460960 CHD3Q12873 2000 aaKnown RBP13.14□□□□□ -0.31
NCK1-202ENST00000460960 OR2M5A3KFT3 312 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 CDHR4A6H8M9 788 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 FAM220BPB1ANY3 271 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 TMEM229AB2RXF0 380 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 DNAJA2O60884 412 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 UBOX5O94941 541 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 MFN2O95140 757 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 NUDT14O95848 222 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 OPN1LWP04000 364 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 PABPC4LP0CB38 370 aaKnown RBP13.14□□□□□ -0.31
NCK1-202ENST00000460960 ETS2P15036 469 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 PSMA4P25789 261 aaKnown RBP13.14□□□□□ -0.31
NCK1-202ENST00000460960 SHC1P29353 583 aa13.14□□□□□ -0.31
NCK1-202ENST00000460960 RYKP34925 604 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms