RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 DEFA6Q01524 100 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 FUT5Q11128 374 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 SWI5Q1ZZU3 235 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 C6orf52Q5T4I8 152 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 ARHGAP40Q5TG30 622 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 C1orf189Q5VU69 101 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 YOD1Q5VVQ6 348 aaPredicted RBP9.59□□□□□ -0.87
HERC4-207ENST00000460168 CDC73Q6P1J9 531 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 NPSR1Q6W5P4 371 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 GDPD3Q7L5L3 318 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 OLIG3Q7RTU3 272 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 SVOPLQ8N434 492 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 BBS10Q8TAM1 723 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 DGAT2Q96PD7 388 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 MRPL37Q9BZE1 423 aaKnown RBP9.59□□□□□ -0.87
HERC4-207ENST00000460168 ACTR6Q9GZN1 396 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 ZCCHC4Q9H5U6 513 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 MIOXQ9UGB7 285 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 MGAT4AQ9UM21 535 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 SRPK3Q9UPE1 567 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 CCDC88CQ9P219 2028 aa9.59□□□□□ -0.87
HERC4-207ENST00000460168 GPR179Q6PRD1 2367 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 KMT2EQ8IZD2 1858 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 D6RAR5 112 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TGFBR3LH3BV60 316 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TCAPO15273 167 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CHRM4P08173 479 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 OR4E1P0C645 316 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ZNF883P0CG24 379 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CD36P16671 472 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TNNI3P19429 210 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CRABP1P29762 137 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 FHL5Q5TD97 284 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 MLIPQ5VWP3 458 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TBPL2Q6SJ96 375 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ISLR2Q6UXK2 745 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 DGAT2L6Q6ZPD8 337 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 PIWIL3Q7Z3Z3 882 aaKnown RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 NAXEQ8NCW5 288 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 RHBDD1Q8TEB9 315 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CDS1Q92903 461 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 RFT1Q96AA3 541 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CTHRC1Q96CG8 243 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 RNF31Q96EP0 1072 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 PTCHD1Q96NR3 888 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 OR1F2PQ96R84 312 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 SOX7Q9BT81 388 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 SPATA5L1Q9BVQ7 753 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 OSBPL11Q9BXB4 747 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 UCK2Q9BZX2 261 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 REEP1Q9H902 201 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 FBXO8Q9NRD0 319 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CALML5Q9NZT1 146 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 FTSJ1Q9UET6 329 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ZNF639Q9UID6 485 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 RARRES3Q9UL19 164 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ASCC3Q8N3C0 2202 aaKnown RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 RALGAPA1Q6GYQ0 2036 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 FLRT2O43155 660 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 EFSO43281 561 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 H2AFB1P0C5Y9 115 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 H2AFB2P0C5Z0 115 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 MAPK3P27361 379 aaPredicted RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 SOX18P35713 384 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 DCTP40126 519 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 GCGRP47871 477 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 SUCLG1P53597 346 aaKnown RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 IGLV3-21P80748 117 aaPredicted RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 SERTAD2Q14140 314 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ODF1Q14990 250 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 DUSP5Q16690 384 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TIGD6Q17RP2 521 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ZIK1Q3SY52 487 aaPredicted RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 PAN3Q58A45 887 aaKnown RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 PLA2G2CQ5R387 149 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 GPR107Q5VW38 600 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CARM1Q86X55 608 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 UBQLNLQ8IYU4 475 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 HS3ST5Q8IZT8 346 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CDRT4Q8N9R6 151 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 OR5K1Q8NHB7 308 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 CA5BP1Q8WTZ4 195 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 SLC35A4Q96G79 324 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TRNT1Q96Q11 434 aaKnown RBP9.58□□□□□ -0.88
HERC4-207ENST00000460168 KCNJ15Q99712 375 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TTYH2Q9BSA4 534 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 TMUB1Q9BVT8 246 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 BCL2L10Q9HD36 194 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 IMPAD1Q9NX62 359 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 NDUFAF4Q9P032 175 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ASH2LQ9UBL3 628 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 PCDHGA1Q9Y5H4 931 aa9.58□□□□□ -0.88
HERC4-207ENST00000460168 ADAMDEC1O15204 470 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 IFNW1P05000 195 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 SAGP10523 405 aaPredicted RBP9.57□□□□□ -0.88
HERC4-207ENST00000460168 ALDH3A2P51648 485 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 MAP2K6P52564 334 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 MGAT2Q10469 447 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 MAP4K2Q12851 820 aa9.57□□□□□ -0.88
HERC4-207ENST00000460168 ZNF155Q12901 538 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms