RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 OIP5O43482 229 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 KIAA0513O60268 411 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 ABCB7O75027 752 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 CYP4B1P13584 511 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 IL7RP16871 459 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 SLC7A1P30825 629 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 LAPTM4AQ15012 233 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 PATL1Q86TB9 770 aaKnown RBP9.45□□□□□ -0.9
USP39-210ENST00000459775 APOBEC4Q8WW27 367 aaKnown RBP9.45□□□□□ -0.9
USP39-210ENST00000459775 NRG4Q8WWG1 115 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 PSMF1Q92530 271 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 SPACA9Q96E40 222 aaPredicted RBP9.45□□□□□ -0.9
USP39-210ENST00000459775 THOC3Q96J01 351 aaKnown RBP9.45□□□□□ -0.9
USP39-210ENST00000459775 ZNF607Q96SK3 696 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 TM9SF2Q99805 663 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 PSD2Q9BQI7 771 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 MMP25Q9NPA2 562 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 VNN3Q9NY84 501 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 HRH3Q9Y5N1 445 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 BOD1L1Q8NFC6 3051 aa9.45□□□□□ -0.9
USP39-210ENST00000459775 ZSCAN5BA6NJL1 495 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OR6C76A6NM76 312 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SMAD7O15105 426 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 TPST2O60704 377 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ITGA10O75578 1167 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CYP7B1O75881 506 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OR6B1O95007 311 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SCAF4O95104 1147 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 UTS2O95399 124 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 HPP00738 406 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 IGHEP01854 428 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CD63P08962 238 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ETS2P15036 469 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 PTNP21246 168 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ATP6V1C1P21283 382 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 DCTP40126 519 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SOX3P41225 446 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ARHGDIAP52565 204 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CD226Q15762 336 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ADIPOQQ15848 244 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 DECR1Q16698 335 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 IQCCQ4KMZ1 466 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 DCAF10Q5QP82 559 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OR5M10Q6IEU7 315 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 LYPD8Q6UX82 237 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ISLR2Q6UXK2 745 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SPATC1Q76KD6 591 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SLC43A2Q8N370 569 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 Q8NFD4 153 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CNOT9Q92600 299 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 FGF11Q92914 225 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ZNF524Q96C55 264 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 RASL10BQ96S79 203 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 AMBRA1Q9C0C7 1298 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SAP130Q9H0E3 1048 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 RNPEPL1Q9HAU8 725 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SAMD4AQ9UPU9 718 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 ZNF443Q9Y2A4 671 aaPredicted RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 NPFFR2Q9Y5X5 522 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 U3KQV3 271 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 A0A1W2PQ72 361 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 PRSS44E7EML9 344 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 NPIPB9F8W1W9 429 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 G3V3Y1 287 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 DVL2O14641 736 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 TSPAN2O60636 221 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SEMG1P04279 462 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CYC1P08574 325 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 IL12BP29460 328 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 TMPRSS3P57727 454 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 RAC3P60763 192 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CHRNB3Q05901 458 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 INPP5JQ15735 1006 aaPredicted RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 NPTX1Q15818 432 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 EXT1Q16394 746 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 FAM98BQ52LJ0 330 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 MRPL2Q5T653 305 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 LPCAT4Q643R3 524 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ANKRD34AQ69YU3 496 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 IL20RBQ6UXL0 311 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 UTS2BQ765I0 119 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 MARCH3Q86UD3 253 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 CARM1Q86X55 608 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 ZDHHC21Q8IVQ6 265 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 HS3ST5Q8IZT8 346 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OR10G3Q8NGC4 313 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OR52E4Q8NGH9 312 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OR6T1Q8NGN1 323 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 NUBPLQ8TB37 319 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 M1APQ8TC57 530 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 DIO2Q92813 273 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 NODALQ96S42 347 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 GALNT9Q9HCQ5 603 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 OLAHQ9NV23 265 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 NDUFAF4Q9P032 175 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 TINAGQ9UJW2 476 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 SPATA2Q9UM82 520 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 PCDHGA9Q9Y5G4 932 aaKnown RBP9.44□□□□□ -0.9
USP39-210ENST00000459775 APC2O95996 2303 aa9.44□□□□□ -0.9
USP39-210ENST00000459775 DPPA5A6NC42 116 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms