RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 TFAP2AP05549 437 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 FUT1P19526 365 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 CXCR1P25024 350 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 HTR3AP46098 478 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 RPL5P46777 297 aaKnown RBP22.21■■□□□ 1.15
U2AF1-204ENST00000459639 SLC9A3P48764 834 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 PCYT1AP49585 367 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 NR1H2P55055 460 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 DLX5P56178 289 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 FXYD6P3P58550 94 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 SMN1Q16637 294 aaKnown RBP22.21■■□□□ 1.15
U2AF1-204ENST00000459639 PAQR8Q8TEZ7 354 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 SAMD8Q96LT4 415 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 FRMD6Q96NE9 622 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 SH2D2AQ9NP31 389 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 TVP23BQ9NYZ1 205 aa22.21■■□□□ 1.15
U2AF1-204ENST00000459639 SH3D21A4FU49 640 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 DPPA5A6NC42 116 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 PTP4A3O75365 173 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 BMP7P18075 431 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 PGGHGQ32M88 737 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 CLEC12AQ5QGZ9 265 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 DCAF10Q5QP82 559 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 TMEM201Q5SNT2 666 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 OR5M10Q6IEU7 315 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 SMARCD3Q6STE5 483 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 OAFQ86UD1 273 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 SIRT6Q8N6T7 355 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 OR2T33Q8NG76 320 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 SLC38A2Q96QD8 506 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 DUSP21Q9H596 190 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 CLN6Q9NWW5 311 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 MED11Q9P086 117 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 DOCK10Q96BY6 2186 aa22.2■■□□□ 1.15
U2AF1-204ENST00000459639 EML6Q6ZMW3 1958 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 B4DXG7 233 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 OR7A10O76100 309 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 SLC35A2P78381 396 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 ACER2Q5QJU3 275 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 SLC46A3Q7Z3Q1 461 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 OR4Q3Q8NH05 313 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 IPCEF1Q8WWN9 437 aaPredicted RBP22.2■■□□□ 1.14
U2AF1-204ENST00000459639 PSMF1Q92530 271 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 THOC3Q96J01 351 aaKnown RBP22.2■■□□□ 1.14
U2AF1-204ENST00000459639 SGCZQ96LD1 299 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 IL4I1Q96RQ9 567 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 CCNB1IP1Q9NPC3 277 aa22.2■■□□□ 1.14
U2AF1-204ENST00000459639 PAK1IP1Q9NWT1 392 aaPredicted RBP22.2■■□□□ 1.14
U2AF1-204ENST00000459639 LIFP15018 202 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 PRKCAP17252 672 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 EFNB1P98172 346 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 EGR4Q05215 589 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 TGIF1Q15583 401 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 ZBED5Q49AG3 693 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 SLC25A30Q5SVS4 291 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 GPALPP1Q8IXQ4 340 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 TCEANCQ8N8B7 351 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 LIPHQ8WWY8 451 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 NTNG2Q96CW9 530 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 FER1L6-AS2Q96M78 137 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 Q96MT0 163 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 ANGPTL4Q9BY76 406 aa22.19■■□□□ 1.14
U2AF1-204ENST00000459639 TRAV27A0A087WT01 109 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 TNFSF12-TNFSF13A0A0A6YY99 330 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 TMED7-TICAM2A0A0A6YYA0 188 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 ETV2O00321 342 aaPredicted RBP22.18■■□□□ 1.14
U2AF1-204ENST00000459639 PRKYO43930 277 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 MRPS14O60783 128 aaKnown RBP22.18■■□□□ 1.14
U2AF1-204ENST00000459639 AIMP2Q13155 320 aaKnown RBP22.18■■□□□ 1.14
U2AF1-204ENST00000459639 RTP5Q14D33 572 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 SNAPC1Q16533 368 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 SLC22A10Q63ZE4 541 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 B3GNTL1Q67FW5 361 aaPredicted RBP22.18■■□□□ 1.14
U2AF1-204ENST00000459639 RTL4Q6ZR62 310 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 FAM26EQ8N5C1 309 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 ZNF540Q8NDQ6 660 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 UBQLN3Q9H347 655 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 MED17Q9NVC6 651 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 TMED7Q9Y3B3 224 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 ZNF337Q9Y3M9 751 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 HRH3Q9Y5N1 445 aa22.18■■□□□ 1.14
U2AF1-204ENST00000459639 PTGES3LE9PB15 166 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 CH25HO95992 272 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 HMGN1P05114 100 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 HTR1AP08908 422 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 CCL3P10147 92 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 GRK5P34947 590 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 CAMK2BQ13554 666 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 FHL1Q13642 323 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 ZNF74Q16587 644 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 OCLNQ16625 522 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 PRAMEF20Q5VT98 475 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 FADS6Q8N9I5 356 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 OR2M3Q8NG83 312 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 OR51A7Q8NH64 312 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 SGCDQ92629 289 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 MCCC2Q9HCC0 563 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 PSORS1C1Q9UIG5 152 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 ANKRD33BA6NCL7 494 aa22.17■■□□□ 1.14
U2AF1-204ENST00000459639 BHLHE40O14503 412 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms