RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 RCBTB2O95199 551 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 IGF2P01344 180 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 PRG2P13727 222 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CHMP24386 653 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 EEF1B2P24534 225 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 POU1F1P28069 291 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 MSX1P28360 303 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 OTX2P32243 289 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 DLSTP36957 453 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 HTR3AP46098 478 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 RPL5P46777 297 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 OMPP47874 163 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 IDH2P48735 452 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 HLCSP50747 726 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 P2RX1P51575 399 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 NR1H2P55055 460 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CTBP2P56545 445 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 ISL1P61371 349 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 PRKCDQ05655 676 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CD47Q08722 323 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 C17orf67Q0P5P2 114 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 MAD2L1BPQ15013 274 aaPredicted RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 PTGES3Q15185 160 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 TMEM44Q2T9K0 475 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 ELOA3BQ3SY89 546 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 SLX4IPQ5VYV7 408 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 ANKRD34AQ69YU3 496 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 SLC27A4Q6P1M0 643 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 C5orf46Q6UWT4 87 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 ZER1Q7Z7L7 766 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 NKAIN4Q8IVV8 208 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 NRMQ8IXM6 262 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CYP4Z2PQ8N1L4 340 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 GATSQ8NAP1 163 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 POGLUT1Q8NBL1 392 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 ELOA3Q8NG57 546 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 OR11G2Q8NGC1 345 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 GRHL3Q8TE85 626 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 FBLIM1Q8WUP2 373 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 TMEM255BQ8WV15 326 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 IPCEF1Q8WWN9 437 aaPredicted RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 SPACA9Q96E40 222 aaPredicted RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 FAM46AQ96IP4 442 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 IMMP1LQ96LU5 166 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 LMF1Q96S06 567 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 SECISBP2Q96T21 854 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 SPRY4Q9C004 299 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 FAM192AQ9GZU8 254 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 AKIRIN1Q9H9L7 192 aaPredicted RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 SLC25A19Q9HC21 320 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 TBC1D23Q9NUY8 699 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CLN6Q9NWW5 311 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 PGPEP1Q9NXJ5 209 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 KLRF1Q9NZS2 232 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 YARS2Q9Y2Z4 477 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 SNX5Q9Y5X3 404 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 CDH10Q9Y6N8 788 aa8.17□□□□□ -1.1
VPS50-207ENST00000458530 UTP20O75691 2785 aaKnown RBP8.17□□□□□ -1.1
VPS50-207ENST00000458530 A0A087WUJ7 227 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SH3D21A4FU49 640 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 UNC119BA6NIH7 251 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.16□□□□□ -1.1
VPS50-207ENST00000458530 SLC1A7O00341 560 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SOCS6O14544 535 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SCO2O43819 266 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 FADS1O60427 444 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 HCN1O60741 890 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 FAM20BO75063 409 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SOX14O95416 240 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 NADKO95544 446 aaPredicted RBP8.16□□□□□ -1.1
VPS50-207ENST00000458530 NUDT14O95848 222 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 HMGN1P05114 100 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SAGP10523 405 aaPredicted RBP8.16□□□□□ -1.1
VPS50-207ENST00000458530 SFTPCP11686 197 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 IFI30P13284 250 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 BMP7P18075 431 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 TTKP33981 857 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 POLR2IP36954 125 aaKnown RBP8.16□□□□□ -1.1
VPS50-207ENST00000458530 SLC1A3P43003 542 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 GPR4P46093 362 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SLC9A3P48764 834 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SSR4P51571 173 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 RELBQ01201 579 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 ZNF117Q03924 483 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 CDK5R2Q13319 367 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 SNTA1Q13424 505 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 APOFQ13790 326 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 CD226Q15762 336 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 NTRK2Q16620 822 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 FAM69BQ5VUD6 431 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 JMJD6Q6NYC1 403 aaPredicted RBP8.16□□□□□ -1.1
VPS50-207ENST00000458530 TMEM81Q6P7N7 255 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 ZNF773Q6PK81 442 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 KIRREL2Q6UWL6 708 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 ZNF620Q6ZNG0 422 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 PTCHD4Q6ZW05 846 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 TMPRSS11FQ6ZWK6 438 aa8.16□□□□□ -1.1
VPS50-207ENST00000458530 TIPARPQ7Z3E1 657 aaKnown RBP8.16□□□□□ -1.1
VPS50-207ENST00000458530 PPP1R32Q7Z5V6 425 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms