RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 SCGB1D1O95968 90 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 GPR18Q14330 331 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 TMPRSS7Q7RTY8 843 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 LKAAEAR1Q8TD35 194 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 OR6C65A6NJZ3 312 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 A8MXE2 369 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 SNAPC3Q92966 411 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 PRRC1Q96M27 445 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 FBXL2Q9UKC9 423 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 PMP2P02689 132 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 PRKACBP22694 351 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 BTN1A1Q13410 526 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 RAB41Q5JT25 222 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 BRIX1Q8TDN6 353 aaKnown RBP18.37■□□□□ 0.53
SNX27-204ENST00000458013 CNOT11Q9UKZ1 510 aaKnown RBP18.37■□□□□ 0.53
SNX27-204ENST00000458013 SUSD5O60279 629 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 ALDOCP09972 364 aaKnown RBP18.37■□□□□ 0.53
SNX27-204ENST00000458013 RPL23AP62750 156 aaKnown RBP18.37■□□□□ 0.53
SNX27-204ENST00000458013 TSSK4Q6SA08 328 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 HSFX1Q9UBD0 423 aa18.37■□□□□ 0.53
SNX27-204ENST00000458013 A6NIZ1 184 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 I6L893 689 aaPredicted RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 FADS1O60427 444 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 ZNF217O75362 1048 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 DNAJB5O75953 348 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 OR8G3PP0DMU2 310 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 RAP1BP61224 184 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 RAP1AP62834 184 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 SHEQ5VZ18 495 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 ADGRG5Q8IZF4 528 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 KCNJ16Q9NPI9 418 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 ZNF140P52738 457 aaPredicted RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 EBPQ15125 230 aaKnown RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 CNN3Q15417 329 aaKnown RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 GPR19Q15760 415 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 RANBP10Q6VN20 620 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 LINC00346Q8IVM7 164 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 MRPL41Q8IXM3 137 aaKnown RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 FIZ1Q96SL8 496 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 A0A1W2PPV4 95 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 TPT1P13693 172 aaKnown RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 C3P1Q6ZMU1 363 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 C1QTNF2Q9BXJ5 285 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 FAM53CQ9NYF3 392 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 ZNF337Q9Y3M9 751 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 NWD2Q9ULI1 1742 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 FJX1Q86VR8 437 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 ADAMTS18Q8TE60 1221 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 ZNF593O00488 134 aaPredicted RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 MT-CO2P00403 227 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 CPOXP36551 454 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 MRPL2Q5T653 305 aaKnown RBP18.36■□□□□ 0.53
SNX27-204ENST00000458013 ZNF417Q8TAU3 575 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 LRIT1Q9P2V4 623 aa18.36■□□□□ 0.53
SNX27-204ENST00000458013 B4DXG7 233 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 CALCBP10092 127 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 CTSAP10619 480 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 TSFMP43897 325 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 EFNA3P52797 238 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 NIPAL3Q6P499 406 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 OR2T11Q8NH01 316 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 C22orf15Q8WYQ4 148 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 KLF16Q9BXK1 252 aaPredicted RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 MRPS34P82930 218 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 RAB31Q13636 194 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 LAX1Q8IWV1 398 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 RPL3LQ92901 407 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 VN1R3Q9BXE9 311 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 NMNAT2Q9BZQ4 307 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 CALHM2Q9HA72 323 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 SDR39U1Q9NRG7 319 aaPredicted RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 AGPAT4Q9NRZ5 378 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 ATG4BQ9Y4P1 393 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 HTR5AP47898 357 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 HBA1P69905 142 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 RPP30P78346 268 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 LANCL3Q6ZV70 420 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 FOXRED1Q96CU9 486 aaPredicted RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 ZNF419Q96HQ0 510 aaPredicted RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 C19orf12Q9NSK7 152 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 COL14A1Q05707 1796 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 TNFSF8P32971 234 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 HIST2H3PS2Q5TEC6 136 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 BORAQ6PGQ7 559 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 DPPA4Q7L190 304 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 DUSP19Q8WTR2 217 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 BSCL2Q96G97 398 aaPredicted RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 TXNL4BQ9NX01 149 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 KLHL42Q9P2K6 505 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 MCTS1Q9ULC4 181 aaKnown RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 PLSCR5A0PG75 271 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 TRAPPC2LH3BP13 241 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 B3GALT4O96024 378 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 FAM83HQ6ZRV2 1179 aaPredicted RBP18.35■□□□□ 0.53
SNX27-204ENST00000458013 CPNE7Q9UBL6 633 aa18.35■□□□□ 0.53
SNX27-204ENST00000458013 SLC6A8P48029 635 aa18.34■□□□□ 0.53
SNX27-204ENST00000458013 YIF1BQ5BJH7 314 aa18.34■□□□□ 0.53
SNX27-204ENST00000458013 LIPHQ8WWY8 451 aa18.34■□□□□ 0.53
SNX27-204ENST00000458013 HCAR1Q9BXC0 346 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms