RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 GDF2Q9UK05 429 aaPredicted RBP13.49□□□□□ -0.25
CROCCP4-201ENST00000457096 LIPT1Q9Y234 373 aa13.49□□□□□ -0.25
CROCCP4-201ENST00000457096 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.49□□□□□ -0.25
CROCCP4-201ENST00000457096 SHISA9B4DS77 424 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 RNF223E7ERA6 249 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 OVOL3O00110 214 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 TM9SF1O15321 606 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 RAD51DO75771 328 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 SOX30O94993 753 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 PAX1P15863 534 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 EPHA3P29320 983 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 ACVR1BP36896 505 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 IDH2P48735 452 aaKnown RBP13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 WDR4P57081 412 aaKnown RBP13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 OR2B6P58173 313 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 P2RY6Q15077 328 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 PPA1Q15181 289 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 C9orf135Q5VTT2 229 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 GALNT5Q7Z7M9 940 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 UBE2J2Q8N2K1 259 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 ZNF433Q8N7K0 673 aaPredicted RBP13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 OR52N5Q8NH56 324 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 TMEM234Q8WY98 164 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 FBXW5Q969U6 566 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 CCDC115Q96NT0 180 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 C1QTNF6Q9BXI9 259 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 TRIM2Q9C040 744 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 SLC38A1Q9H2H9 487 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 ESRP2Q9H6T0 727 aaKnown RBP13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 GP6Q9HCN6 339 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 AIG1Q9NVV5 245 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 CHRNA9Q9UGM1 479 aa13.48□□□□□ -0.25
CROCCP4-201ENST00000457096 TMEM72A0PK05 275 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 ZC3H12DA2A288 527 aaKnown RBP13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 ZNF724A8MTY0 619 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 CD8AP01732 235 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 IMPDH2P12268 514 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 KCNJ10P78508 379 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 VEZF1Q14119 521 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 MAPK11Q15759 364 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 CLEC12BQ2HXU8 276 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 GTDC1Q4AE62 458 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 ZNF621Q6ZSS3 439 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 MTDHQ86UE4 582 aaKnown RBP13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 ARFGAP2Q8N6H7 521 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 OR52E4Q8NGH9 312 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 HTRA1Q92743 480 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 GTPBP3Q969Y2 492 aaKnown RBP13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 PANX1Q96RD7 426 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 SSU72Q9NP77 194 aaKnown RBP13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 RLIMQ9NVW2 624 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 ADAM21Q9UKJ8 722 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 SLC35A3Q9Y2D2 325 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 NOSIPQ9Y314 301 aaKnown RBP13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 GPR45Q9Y5Y3 372 aa13.47□□□□□ -0.25
CROCCP4-201ENST00000457096 A0A1W2PP18 115 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 FAM171A2A8MVW0 826 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 IGHV4-39P01824 125 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 GGT1P19440 569 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 COX5AP20674 150 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 APOBEC1P41238 236 aaKnown RBP13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 ZNF83P51522 516 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 CLNS1AP54105 237 aaKnown RBP13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 CDH11P55287 796 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 CSNK2A1P68400 391 aaPredicted RBP13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 GRINAQ7Z429 371 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 VPS37AQ8NEZ2 397 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 ARL8AQ96BM9 186 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 OR52E6Q96RD3 313 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 MDFIQ99750 246 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 POLE3Q9NRF9 147 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 BTNL2Q9UIR0 455 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 OSGIN1Q9UJX0 560 aa13.46□□□□□ -0.25
CROCCP4-201ENST00000457096 IGKV3D-15A0A087WSY6 115 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 TMED7-TICAM2A0A0A6YYA0 188 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 CCT8L1PA6NM43 557 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 ABCD4O14678 606 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 AGR2O95994 175 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 PGRP06401 933 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 GKN3PP0CG01 181 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 TACR3P29371 465 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 HPCAP84074 193 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 SLC9B1Q4ZJI4 515 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 RPS26P11Q5JNZ5 115 aaPredicted RBP13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 MRPL2Q5T653 305 aaKnown RBP13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 HHATQ5VTY9 493 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 FBXW9Q5XUX1 488 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 NXNQ6DKJ4 435 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 OGFOD2Q6N063 350 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 MAVSQ7Z434 540 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 VRK2Q86Y07 508 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 PIAS4Q8N2W9 510 aaPredicted RBP13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 APH1AQ96BI3 265 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 AURKBQ96GD4 344 aaPredicted RBP13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 NGBQ9NPG2 151 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 CISD1Q9NZ45 108 aaKnown RBP13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 TMED7Q9Y3B3 224 aa13.45□□□□□ -0.26
CROCCP4-201ENST00000457096 ABCA2Q9BZC7 2435 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms