RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 MAZP56270 477 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 ARPC4P59998 168 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 FAM53BQ14153 422 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 ZSWIM7Q19AV6 140 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 ALG10BQ5I7T1 473 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF550Q7Z398 422 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 PARGQ86W56 976 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 FBXL4Q9UKA2 621 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 TMEM131Q92545 1883 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 VCANP13611 3396 aa16.91■□□□□ 0.3
SEMA3B-209ENST00000456560 BLACEA4D250 179 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 MRPL3P09001 348 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF3P17036 446 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 P2RY14Q15391 338 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 LCN1P1Q5VSP4 162 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 GPALPP1Q8IXQ4 340 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 CYB561A3Q8NBI2 242 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ACOT12Q8WYK0 555 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 SMPDL3BQ92485 455 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 NDC1Q9BTX1 674 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 PPIL3Q9H2H8 161 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 PRTFDC1Q9NRG1 225 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 MRPS33Q9Y291 106 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 PCDHGB7Q9Y5F8 929 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 SYNDIG1LA6NDD5 238 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 F8A1P23610 371 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 GPR3P46089 330 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC16A1P53985 500 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ATP12AP54707 1039 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 BTG2P78543 158 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 MAT1AQ00266 395 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 E2F1Q01094 437 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ERV3-1Q14264 604 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ZNF267Q14586 743 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ARHGAP11AQ6P4F7 1023 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ULK3Q6PHR2 472 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 KIRREL2Q6UWL6 708 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 Q8N402 240 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 UBE2ZQ9H832 354 aaPredicted RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 B3GAT2Q9NPZ5 323 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 ACOXLQ9NUZ1 547 aa16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 TDRD6O60522 2096 aaKnown RBP16.9■□□□□ 0.3
SEMA3B-209ENST00000456560 SLC19A2O60779 497 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 SLC2A2P11168 524 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 HLA-DMAP28067 261 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 NUDT1P36639 197 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 GABRA4P48169 554 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CRYZQ08257 329 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 TRAM1Q15629 374 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 ARL9Q6T311 187 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CADM2Q8N3J6 435 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 TCTN2Q96GX1 697 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 ZNF285Q96NJ3 590 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 MAP3K3Q99759 626 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 ERVMER34-1Q9H9K5 563 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 MALT1Q9UDY8 824 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CHRNA9Q9UGM1 479 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 PRAMEF2O60811 474 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CPNE3O75131 537 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CDC123O75794 336 aaPredicted RBP16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 NSA2O95478 260 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 IFNGP01579 166 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CT45A8P0DMV1 189 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CT45A9P0DMV2 189 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 PSMD4P55036 377 aaKnown RBP16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 SKP1P63208 163 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CT45A2Q5DJT8 189 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 PAMR1Q6UXH9 720 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 CMIPQ8IY22 773 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 OR6C4Q8NGE1 309 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 ADAMTS18Q8TE60 1221 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 C4orf36Q96KX1 117 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 GUCD1Q96NT3 240 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 DGAT2Q96PD7 388 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 G6PC3Q9BUM1 346 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 IRF2BPLQ9H1B7 796 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 Q9N2J8 555 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 LRIT1Q9P2V4 623 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 ICAM5Q9UMF0 924 aa16.89■□□□□ 0.29
SEMA3B-209ENST00000456560 OR2W5A6NFC9 320 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 SHC1P29353 583 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 TAS2R43P59537 309 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 FUT7Q11130 342 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 HBMQ6B0K9 141 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 FAAH2Q6GMR7 532 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 PLET1Q6UQ28 207 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 TRILQ7L0X0 811 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ARL14Q8N4G2 192 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 OR5M3Q8NGP4 307 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ABHD4Q8TB40 342 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 SMAP2Q8WU79 429 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 UBL7Q96S82 380 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 GON7Q9BXV9 100 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 C2orf42Q9NWW7 574 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 ADAM30Q9UKF2 790 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 EFCAB7A8K855 629 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 J3QLW9 94 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 SC5DO75845 299 aa16.88■□□□□ 0.29
SEMA3B-209ENST00000456560 GYPBP06028 91 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms