RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 COQ8BQ96D53 544 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 OR7D2Q96RA2 312 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF300Q96RE9 604 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 CITED4Q96RK1 184 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 SDF2Q99470 211 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 INPP5KQ9BT40 448 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 BHLHE41Q9C0J9 482 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 TNFRSF12AQ9NP84 129 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 MYOZ1Q9NP98 299 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 POLE3Q9NRF9 147 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ACER3Q9NUN7 267 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 EXD2Q9NVH0 621 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 GPATCH2Q9NW75 528 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 PARPBPQ9NWS1 579 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 ING1Q9UK53 422 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 FBXO9Q9UK97 447 aaPredicted RBP7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 SLC35A3Q9Y2D2 325 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 AMDHD2Q9Y303 409 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 FIS1Q9Y3D6 152 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 HDGFL3Q9Y3E1 203 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 TRAF6Q9Y4K3 522 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 DNAJC15Q9Y5T4 150 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 PTGDR2Q9Y5Y4 395 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 FKBP7Q9Y680 259 aa7.07□□□□□ -1.28
NIF3L1-209ENST00000454952 A0A096LNT2 108 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 NPIPA5A0A0B4J1W7 369 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 A0A1W2PPM1 405 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 E7EQL1 145 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 NPIPA7E9PJI5 369 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 NDUFS8O00217 210 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 OIP5O43482 229 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 NPHS1O60500 1241 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 EIF1BO60739 113 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MRPL33O75394 65 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 RAD51DO75771 328 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 CYP7B1O75881 506 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 H6PDO95479 791 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 PMS2P2O95744 297 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 C6orf47O95873 294 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 NPIPA8P0DM63 369 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 TFPIP10646 304 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 LAMP1P11279 417 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SRD5A1P18405 259 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 KRT4P19013 534 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 EFNA1P20827 205 aaPredicted RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 APOBEC3AP31941 199 aaPredicted RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SERPINB5P36952 375 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MAGEA8P43361 318 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 HTR3AP46098 478 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MAP2K6P52564 334 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SLC16A1P53985 500 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SESN3P58005 492 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 CHRNEQ04844 493 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MAD2L1Q13257 205 aaPredicted RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SKP2Q13309 424 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 FAM153CQ494X1 144 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 PDZK1Q5T2W1 519 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 KLHL24Q6TFL4 600 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 C16orf62Q7Z3J2 963 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 GRINAQ7Z429 371 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 ATG4DQ86TL0 474 aaPredicted RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 C10orf107Q8IVU9 208 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 EIF1ADQ8N9N8 165 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF540Q8NDQ6 660 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 OR7A2PQ8NGA2 310 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 OR52N5Q8NH56 324 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 ZNF563Q8TA94 476 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MUS81Q96NY9 551 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 KLHDC3Q9BQ90 382 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 THUMPD3Q9BV44 507 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 TUBB1Q9H4B7 451 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MOV10Q9HCE1 1003 aaKnown RBP7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 OBP2BQ9NPH6 170 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 NPAP1Q9NZP6 1156 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MALT1Q9UDY8 824 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 CHRNA9Q9UGM1 479 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 PRDM4Q9UKN5 801 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 KCNS2Q9ULS6 477 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 PCDHGB4Q9UN71 923 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 TRAPPC4Q9Y296 219 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SLC9A8Q9Y2E8 581 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 SLC25A15Q9Y619 301 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 ATP23Q9Y6H3 246 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 MALRD1Q5VYJ5 2156 aa7.06□□□□□ -1.28
NIF3L1-209ENST00000454952 ARFGEF3Q5TH69 2177 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 C9JVG2 144 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 M0R1B8 84 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 PIP5K1BO14986 540 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 GPRIN2O60269 458 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 LMX1BO60663 402 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 WNT11O96014 354 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 UBTFL6P0CB48 400 aaPredicted RBP7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 UQCRBP14927 111 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 MATN1P21941 496 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 SOAT1P35610 550 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 PDLIM4P50479 330 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 PRPS1P60891 318 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 SNRPD2P62316 118 aaKnown RBP7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 PHC1P78364 1004 aa7.05□□□□□ -1.28
NIF3L1-209ENST00000454952 SLC35A1P78382 337 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms