RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PLEKHG7Q6ZR37 379 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 C1orf87Q8N0U7 546 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 HORMAD2Q8N7B1 307 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ACBD4Q8NC06 268 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 OR5T3Q8NGG3 340 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 HMGCLL1Q8TB92 370 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 SERPINI1Q99574 410 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 METTL9Q9H1A3 318 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 PPIL3Q9H2H8 161 aaKnown RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 KCNK15Q9H427 330 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 MCCC2Q9HCC0 563 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 SLC52A3Q9NQ40 469 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 HEBP1Q9NRV9 189 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ARMCX1Q9P291 453 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 RSL24D1Q9UHA3 163 aaKnown RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 IKZF3Q9UKT9 509 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 KIAA1324LA8MWY0 1029 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 AQP9O43315 295 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 SULT1C4O75897 302 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 NADKO95544 446 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 GP1BAP07359 652 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ADH5P11766 374 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ARSAP15289 507 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 GPX3P22352 226 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 LHCGRP22888 699 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 FCARP24071 287 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 NDUFS1P28331 727 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 MPLP40238 635 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 PTGFRP43088 359 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 COMPP49747 757 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 CEBPGP53567 150 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 RAG2P55895 527 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 DPTQ07507 201 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 BNIP2Q12982 314 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 CDK5R2Q13319 367 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ARL6IP1Q15041 203 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 LTB4RQ15722 352 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 PIGGQ5H8A4 983 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 TMEM196Q5HYL7 178 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 HACD4Q5VWC8 232 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 IDO2Q6ZQW0 420 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ARPINQ7Z6K5 226 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 LDB1Q86U70 411 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 GPSM1Q86YR5 675 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 MMAAQ8IVH4 418 aaKnown RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 GID4Q8IVV7 300 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 KYQ8NBH2 561 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 FAM110BQ8TC76 370 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 AP3S1Q92572 193 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 FCRL1Q96LA6 429 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 MYADMQ96S97 322 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 SDR39U1Q9NRG7 319 aaPredicted RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 PHF11Q9UIL8 331 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 HCFC2Q9Y5Z7 792 aa7.16□□□□□ -1.26
BRCC3-208ENST00000453705 ZFC3H1O60293 1989 aaKnown RBP7.16□□□□□ -1.26
BRCC3-208ENST00000453705 H3BNX3 289 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 GFYI3L273 518 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 TIMM8AO60220 97 aaPredicted RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 RBMXL2O75526 392 aaKnown RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 TNFAIP8O95379 198 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 ITGB7P26010 798 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 GIFP27352 417 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 AP1S2P56377 157 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 BNIP3Q12983 259 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 NPTX1Q15818 432 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 KCNJ8Q15842 424 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 LY6G5CQ5SRR4 150 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 LIPKQ5VXJ0 399 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 TMEM215Q68D42 235 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 DPY19L3Q6ZPD9 716 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 RBM23Q86U06 439 aaKnown RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 CENPSQ8N2Z9 138 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 FAM83FQ8NEG4 500 aaPredicted RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 NUDCD2Q8WVJ2 157 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 HGDQ93099 445 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 POP5Q969H6 163 aaKnown RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 AKR1E2Q96JD6 320 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 P2RY13Q9BPV8 354 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 NSUN3Q9H649 340 aaKnown RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 EFCAB1Q9HAE3 211 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 SIRT7Q9NRC8 400 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 ERVK13-1Q9NX77 482 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 FOXJ3Q9UPW0 622 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 A0A1W2PPC1 479 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 NEMP2A6NFY4 417 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 EPOPA6NHQ4 379 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 CCL22O00626 93 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 UBDO15205 165 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 RFPL2O75678 378 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 CLDN7O95471 211 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 PIRTP0C851 137 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 EIF2S3P41091 472 aaKnown RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 RAB9AP51151 201 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 C16orf72Q14CZ0 275 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 TSNQ15631 228 aaKnown RBP7.15□□□□□ -1.26
BRCC3-208ENST00000453705 SFT2D3Q587I9 215 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 ZFP1Q6P2D0 407 aa7.15□□□□□ -1.26
BRCC3-208ENST00000453705 SMIM15Q7Z3B0 74 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms