RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DUSP8Q13202 625 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 PTGES3Q15185 160 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 SYPL1Q16563 259 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 ARHGAP11BQ3KRB8 267 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 EXOSC6Q5RKV6 272 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 PAPD4Q6PIY7 484 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 SLC29A4Q7RTT9 530 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 OR1N1Q8NGS0 311 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 C16orf52Q8NHV5 167 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 ZNF721Q8TF20 911 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 AP3S1Q92572 193 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 SLC25A46Q96AG3 418 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 VSTM2LQ96N03 204 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 SPATA5L1Q9BVQ7 753 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 GPR87Q9BY21 358 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 TRIM45Q9H8W5 580 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 Q9N2J8 555 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 MRPL39Q9NYK5 338 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 KCND3Q9UK17 655 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 FARSAQ9Y285 508 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 RPL36Q9Y3U8 105 aaKnown RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 PTPRZ1P23471 2315 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 IRGMA1A4Y4 181 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 RGS5O15539 181 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 TPST2O60704 377 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 IGKV3-11P04433 115 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 STAT5AP42229 794 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 GZMKP49863 264 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 SLC37A1P57057 533 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 DCAF7P61962 342 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 SPHARQ15513 63 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 BAK1Q16611 211 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 OCLNQ16625 522 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 LCN1P1Q5VSP4 162 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 HEPHL1Q6MZM0 1159 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 IGF2-ASQ6U949 168 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 CREB3L2Q70SY1 520 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 MARCH9Q86YJ5 346 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 SUN5Q8TC36 379 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 HOXB13Q92826 284 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 TREX2Q9BQ50 279 aaPredicted RBP14.59□□□□□ -0.07
SNX17-204ENST00000453453 BCL2L10Q9HD36 194 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 ACER3Q9NUN7 267 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 TCFL5Q9UL49 500 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 OR10H1Q9Y4A9 318 aa14.59□□□□□ -0.07
SNX17-204ENST00000453453 CEP250Q9BV73 2442 aa14.58□□□□□ -0.07
SNX17-204ENST00000453453 IGHV3-20A0A0C4DH32 117 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 AP3D1O14617 1153 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 GADD45GO95257 159 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 CLPSP04118 112 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 UMODP07911 640 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 DLSTP36957 453 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 PLA2G5P39877 138 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 MAP3K8P41279 467 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 PCBP3P57721 371 aaKnown RBP14.58□□□□□ -0.08
SNX17-204ENST00000453453 FAPQ12884 760 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 RIN1Q13671 783 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 RPS26P11Q5JNZ5 115 aaPredicted RBP14.58□□□□□ -0.08
SNX17-204ENST00000453453 SLC25A30Q5SVS4 291 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 DCST2Q5T1A1 773 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 PDZK1Q5T2W1 519 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 DDI2Q5TDH0 399 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 C12orf73Q69YU5 71 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 MZT2BQ6NZ67 158 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 FAM109AQ8N4B1 249 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 NANOGP1Q8N7R0 232 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 DMRTB1Q96MA1 342 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 TTYH2Q9BSA4 534 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 NUDT9Q9BW91 350 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 NRSN2Q9GZP1 204 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 EXOSC4Q9NPD3 245 aaKnown RBP14.58□□□□□ -0.08
SNX17-204ENST00000453453 RLIMQ9NVW2 624 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 MGAT4BQ9UQ53 548 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 KCNE3Q9Y6H6 103 aa14.58□□□□□ -0.08
SNX17-204ENST00000453453 LOC102723996A0A087X1L8 192 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 C2orf92A0A1B0GVN3 265 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 CDRT15L2A8MXV6 281 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 ZNF780AO75290 641 aaPredicted RBP14.57□□□□□ -0.08
SNX17-204ENST00000453453 OSMP13725 252 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 MMP11P24347 488 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 TRHRP34981 398 aaPredicted RBP14.57□□□□□ -0.08
SNX17-204ENST00000453453 PPICP45877 212 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 SLC9A3P48764 834 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 FUT5Q11128 374 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 IKZF1Q13422 519 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 FAM131AQ6UXB0 335 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 LAX1Q8IWV1 398 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 ZNF321PQ8N8H1 164 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 DUSP18Q8NEJ0 188 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 ENKURQ8TC29 256 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 C8orf44Q96CB5 159 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 GAL3ST4Q96RP7 486 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 POLE3Q9NRF9 147 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 PPIEQ9UNP9 301 aaKnown RBP14.57□□□□□ -0.08
SNX17-204ENST00000453453 WDR45Q9Y484 360 aa14.57□□□□□ -0.08
SNX17-204ENST00000453453 DCDC2BA2VCK2 349 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 PRAMEF27A3QJZ7 478 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 STX11O75558 287 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 CHRM4P08173 479 aa14.56□□□□□ -0.08
SNX17-204ENST00000453453 CSF3P09919 207 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms