RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	SYT14P1	Q58G82	188 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC25A53	Q5H9E4	307 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859		Q5PR19	223 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	C6orf10	Q5SRN2	563 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	BEND6	Q5SZJ8	279 aa	Predicted RBP	7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	ZNF704	Q6ZNC4	412 aa	Predicted RBP	7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	MAVS	Q7Z434	540 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	P3H2	Q8IVL5	708 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	LRRC34	Q8IZ02	419 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	ARFGAP2	Q8N6H7	521 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	OR9I1	Q8NGQ6	314 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	WDR60	Q8WVS4	1066 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	ST8SIA1	Q92185	356 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	TLCD1	Q96CP7	247 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	PLPPR2	Q96GM1	343 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	OR52B2	Q96RD2	323 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	OR11A1	Q9GZK7	315 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	GSX1	Q9H4S2	264 aa	Predicted RBP	7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC6A13	Q9NSD5	602 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	ACER3	Q9NUN7	267 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	BEX4	Q9NWD9	120 aa	Predicted RBP	7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	KLHL9	Q9P2J3	617 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	PRSS50	Q9UI38	385 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC35A3	Q9Y2D2	325 aa		7.71	□□□□□ -1.18
RFX3-209	ENST00000451859	CR1	P17927	2039 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SLCO1B7	G3V0H7	640 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	CLOCK	O15516	846 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	KLF4	O43474	513 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ADAM11	O75078	769 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	GCM2	O75603	506 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC22A3	O75751	556 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	LYZL6	O75951	148 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ADA	P00813	363 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	IGHV3-9	P01782	118 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	YES1	P07947	543 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	NID1	P14543	1247 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	IDO1	P14902	403 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PPP3CB	P16298	524 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PSMB1	P20618	241 aa	Known RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	EDNRA	P25101	427 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	LOX	P28300	417 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	CRAT	P43155	626 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PCYT1A	P49585	367 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	RAC3	P60763	192 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PLAUR	Q03405	335 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	STK11	Q15831	433 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ACKR1	Q16570	336 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PDCD4	Q53EL6	469 aa	Known RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	BEX5	Q5H9J7	111 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859		Q71RC1	249 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ZNF100	Q8IYN0	542 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	GABRG1	Q8N1C3	465 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC43A2	Q8N370	569 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	GLB1L3	Q8NCI6	653 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	FAM71C	Q8NEG0	241 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	STEAP2	Q8NFT2	490 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PIWIL2	Q8TC59	973 aa	Known RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ZNF75CP	Q92670	426 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	KISS1R	Q969F8	398 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	VPS33A	Q96AX1	596 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	AURKB	Q96GD4	344 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ARL5B	Q96KC2	179 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SMR3A	Q99954	134 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	PSD2	Q9BQI7	771 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	TACO1	Q9BSH4	297 aa	Known RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SAP130	Q9H0E3	1048 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC38A1	Q9H2H9	487 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	POLE3	Q9NRF9	147 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	SPIN1	Q9Y657	262 aa	Predicted RBP	7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	TLN2	Q9Y4G6	2542 aa		7.7	□□□□□ -1.18
RFX3-209	ENST00000451859	ALPK2	Q86TB3	2170 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	ZAN	Q9Y493	2812 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	TMED7-TICAM2	A0A0A6YYA0	188 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	ZNF814	B7Z6K7	855 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	UBD	O15205	165 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	CYTIP	O60759	359 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	KRT75	O95678	551 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	BCHE	P06276	602 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	GKN3P	P0CG01	181 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	ETFA	P13804	333 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	IL7R	P16871	459 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	FPR1	P21462	350 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	APOBEC1	P41238	236 aa	Known RBP	7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	OR3A2	P47893	321 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	OR2B6	P58173	313 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	DSTN	P60981	165 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	CSNK2A1	P68400	391 aa	Predicted RBP	7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	SFRP5	Q5T4F7	317 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	MRPL2	Q5T653	305 aa	Known RBP	7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	SLC2A7	Q6PXP3	512 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	ZNF836	Q6ZNA1	936 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	LRRC74B	Q6ZQY2	392 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	TMPPE	Q6ZT21	453 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	BHLHA15	Q7RTS1	189 aa	Predicted RBP	7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	GRINA	Q7Z429	371 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	ATG4D	Q86TL0	474 aa	Predicted RBP	7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	VRK2	Q86Y07	508 aa		7.69	□□□□□ -1.18
RFX3-209	ENST00000451859	UBE2J2	Q8N2K1	259 aa		7.69	□□□□□ -1.18

Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms