RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 OR4D11Q8NGI4 311 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF671Q8TAW3 534 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ABHD4Q8TB40 342 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 LGALS14Q8TCE9 139 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SNX33Q8WV41 574 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SLAMF9Q96A28 289 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CXorf40BQ96DE9 158 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 GAS2L1Q99501 681 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 SMAD5Q99717 465 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 VRK1Q99986 396 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 RSPO3Q9BXY4 272 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 KLHL31Q9H511 634 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TMEM231Q9H6L2 316 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PDFQ9HBH1 243 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TMEM138Q9NPI0 162 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 MRPL17Q9NRX2 175 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 TDP1Q9NUW8 608 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 TAS2R10Q9NYW0 307 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CACNG4Q9UBN1 327 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 A4GNTQ9UNA3 340 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SLC22A14Q9Y267 594 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PRSS21Q9Y6M0 314 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PLXNA4Q9HCM2 1894 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 IGLV3-10A0A075B6K4 115 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 NUDT19A8MXV4 375 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ANKRD66B4E2M5 251 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 NPIPB9F8W1W9 429 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 STMND1H3BQB6 276 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 AP4M1O00189 453 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 INSIG1O15503 277 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF749O43361 778 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 FADS1O60427 444 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZIC2O95409 532 aaPredicted RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 CH25HO95992 272 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CD2P06729 351 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CD53P19397 219 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 UQCRC2P22695 453 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CERS1P27544 350 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 HTR1FP30939 366 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 DCTDP32321 178 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 AHRP35869 848 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 GPR15P49685 360 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 RAB5CP51148 216 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ELAVL2Q12926 359 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 XKR4Q5GH76 650 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 FBXL22Q6P050 247 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF813Q6ZN06 617 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 REC114Q7Z4M0 266 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SCD5Q86SK9 330 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 MEX3DQ86XN8 651 aaKnown RBP7.99□□□□□ -1.13
LSM5-208ENST00000450169 LINC00471Q8N535 108 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF383Q8NA42 475 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 BBS1Q8NFJ9 593 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 OSTF1Q92882 214 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PLD4Q96BZ4 506 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 SHDQ96IW2 340 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 CLCC1Q96S66 551 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 WFDC6Q9BQY6 131 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ALG8Q9BVK2 526 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 FNDC11Q9BVV2 318 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ACKR4Q9NPB9 350 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 GFOD1Q9NXC2 390 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 PCDHGC4Q9Y5F7 938 aa7.99□□□□□ -1.13
LSM5-208ENST00000450169 ZNF106Q9H2Y7 1883 aaKnown RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 NINQ8N4C6 2090 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 A0A1W2PP55 124 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 URADA6NGE7 173 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 MCIDASD6RGH6 385 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 SYT5O00445 386 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PPM1DO15297 605 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 TGM5O43548 720 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PLPP2O43688 288 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ADAMTS4O75173 837 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 OR2F2O95006 317 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 MT-ND4LP03901 98 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 RLN1P04808 185 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 LGALS2P05162 132 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 RB1P06400 928 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CD22P20273 847 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PCSK1P29120 753 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 SLC6A12P48065 614 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 YBEYP58557 167 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 IRF8Q02556 426 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 OR2F1Q13607 317 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 AKIRIN2Q53H80 203 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PYY3Q5JQD4 70 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 FAM151BQ6UXP7 276 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 SSX6Q7RTT6 188 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 SYT9Q86SS6 491 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 FBXO16Q8IX29 292 aaPredicted RBP7.98□□□□□ -1.13
LSM5-208ENST00000450169 ACBD7Q8N6N7 88 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 OR51G2Q8NGK0 314 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 SLC38A5Q8WUX1 472 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CBY1Q9Y3M2 126 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PCDHGA1Q9Y5H4 931 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 PLXNB2O15031 1838 aa7.98□□□□□ -1.13
LSM5-208ENST00000450169 CKAP5Q14008 2032 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms