RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 Q5PR19 223 aa17.48■□□□□ 0.39
VCP-203ENST00000448530 AGBL2Q5U5Z8 902 aa17.48■□□□□ 0.39
VCP-203ENST00000448530 Q6ZT83 130 aa17.48■□□□□ 0.39
VCP-203ENST00000448530 MSANTD1Q6ZTZ1 278 aa17.48■□□□□ 0.39
VCP-203ENST00000448530 MIER2Q8N344 545 aa17.48■□□□□ 0.39
VCP-203ENST00000448530 OR52B2Q96RD2 323 aa17.48■□□□□ 0.39
VCP-203ENST00000448530 ZNF300Q96RE9 604 aaPredicted RBP17.48■□□□□ 0.39
VCP-203ENST00000448530 NF1P21359 2839 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 TMEM247A6NEH6 219 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 DNPH1O43598 174 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 PMS2P2O95744 297 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 ZCCHC18P0CG32 403 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 POLR2HP52434 150 aaKnown RBP17.47■□□□□ 0.39
VCP-203ENST00000448530 OR2B6P58173 313 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 STX1BP61266 288 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 C6orf10Q5SRN2 563 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 BHLHA15Q7RTS1 189 aaPredicted RBP17.47■□□□□ 0.39
VCP-203ENST00000448530 MAVSQ7Z434 540 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 ZNF440Q8IYI8 595 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 PIGXQ8TBF5 258 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 DDIT4LQ96D03 193 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 POTEKPQ9BYX7 375 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 ESRP2Q9H6T0 727 aaKnown RBP17.47■□□□□ 0.39
VCP-203ENST00000448530 DLL4Q9NR61 685 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 PRSS50Q9UI38 385 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 ING1Q9UK53 422 aaPredicted RBP17.47■□□□□ 0.39
VCP-203ENST00000448530 USH1CQ9Y6N9 552 aa17.47■□□□□ 0.39
VCP-203ENST00000448530 RAI1Q7Z5J4 1906 aaPredicted RBP17.47■□□□□ 0.39
VCP-203ENST00000448530 TMED7-TICAM2A0A0A6YYA0 188 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 CFAP73A6NFT4 308 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 ZNF814B7Z6K7 855 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 AP3D1O14617 1153 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 GPR171O14626 319 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 ETFAP13804 333 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 ADSLP30566 484 aaPredicted RBP17.46■□□□□ 0.39
VCP-203ENST00000448530 CRISP3P54108 245 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 DSTNP60981 165 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 PDK3Q15120 406 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 TAB1Q15750 504 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 MRPL2Q5T653 305 aaKnown RBP17.46■□□□□ 0.39
VCP-203ENST00000448530 ABLIM2Q6H8Q1 611 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 ADGRG3Q86Y34 549 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 LRRC8CQ8TDW0 803 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 TMEM171Q8WVE6 324 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 DNAJA3Q96EY1 480 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 PERPQ96FX8 193 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 ARL5BQ96KC2 179 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 C18orf12Q96KH6 178 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 OR11A1Q9GZK7 315 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 TPT1P8Q9HAU6 139 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 SLC6A13Q9NSD5 602 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 THUMPD1Q9NXG2 353 aaKnown RBP17.46■□□□□ 0.39
VCP-203ENST00000448530 TMEM181Q9P2C4 612 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 NOSIPQ9Y314 301 aaKnown RBP17.46■□□□□ 0.39
VCP-203ENST00000448530 TMED7Q9Y3B3 224 aa17.46■□□□□ 0.39
VCP-203ENST00000448530 PRR14LQ5THK1 2151 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 FAM234BA2RU67 622 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 FAAHO00519 579 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 HS3ST1O14792 307 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 POLR3GO15318 223 aaPredicted RBP17.45■□□□□ 0.38
VCP-203ENST00000448530 LYZL6O75951 148 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 CNOT4O95628 575 aaKnown RBP17.45■□□□□ 0.38
VCP-203ENST00000448530 PLAUP00749 431 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 BCHEP06276 602 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 CD3EP07766 207 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 RPS4Y1P22090 263 aaKnown RBP17.45■□□□□ 0.38
VCP-203ENST00000448530 TACR3P29371 465 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 SLC1A3P43003 542 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 MAP2K6P52564 334 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 PLAURQ03405 335 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 STK11Q15831 433 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 LIN52Q52LA3 116 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 BIVMQ86UB2 503 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 UBE2J2Q8N2K1 259 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 OR9I1Q8NGQ6 314 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 OR52P1PQ8NH57 321 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 VPS33AQ96AX1 596 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 C7orf26Q96N11 449 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 TMEM204Q9BSN7 226 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 ZNF232Q9UNY5 417 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 TRAPPC4Q9Y296 219 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 RNF115Q9Y4L5 304 aa17.45■□□□□ 0.38
VCP-203ENST00000448530 IGKV3D-15A0A087WSY6 115 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 CLOCKO15516 846 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 ZNF208O43345 1280 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 ADAM11O75078 769 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 COPZ1P61923 177 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 SLC35A1P78382 337 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 LARS2Q15031 903 aaKnown RBP17.44■□□□□ 0.38
VCP-203ENST00000448530 EPGNQ6UW88 154 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 PRSS57Q6UWY2 283 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.44■□□□□ 0.38
VCP-203ENST00000448530 YTHDF3Q7Z739 585 aaKnown RBP17.44■□□□□ 0.38
VCP-203ENST00000448530 KRTAP1-3Q8IUG1 177 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 ZNF611Q8N823 705 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 DYDC1Q8WWB3 177 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 AKAP1Q92667 903 aaKnown RBP eCLIP17.44■□□□□ 0.38
VCP-203ENST00000448530 APH1AQ96BI3 265 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 MUCL1Q96DR8 90 aa17.44■□□□□ 0.38
VCP-203ENST00000448530 NAA11Q9BSU3 229 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms