RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 ELF4Q99607 663 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 RNF32Q9H0A6 362 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 OR52A5Q9H2C5 316 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 LSM5Q9Y4Y9 91 aaKnown RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 TMEM14AQ9Y6G1 99 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 GPR39O43194 453 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ARAFP10398 606 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SEZ6L2Q6UXD5 910 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 LKAAEAR1Q8TD35 194 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 FAM83CQ9BQN1 747 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 MEPEQ9NQ76 525 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 LGALSLQ3ZCW2 172 aaPredicted RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 CXCL17Q6UXB2 119 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 HORMAD2Q8N7B1 307 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 SLAMF9Q96A28 289 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 TMEM38AQ9H6F2 299 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 HIF3AQ9Y2N7 669 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 ETV7Q9Y603 341 aa7.37□□□□□ -1.23
SMG1-202ENST00000446231 MYO5AQ9Y4I1 1855 aaKnown RBP7.37□□□□□ -1.23
SMG1-202ENST00000446231 M0QYG6 137 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZNF593O00488 134 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC1A3P43003 542 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ADAM5Q6NVV9 412 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR51S1Q8NGJ8 323 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 NEURL3Q96EH8 262 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SORCS2Q96PQ0 1159 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 BTBD17A6NE02 478 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZNF587BE7ETH6 402 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 PCCBP05166 539 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR2AJ1Q8NGZ0 328 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 CHTF18Q8WVB6 975 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZNF514Q96K75 400 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 PLEKHB1Q9UF11 243 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 BCL2L11O43521 198 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 F10P00742 488 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 HMGCLP35914 325 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 FAM109BQ6ICB4 259 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 IL34Q6ZMJ4 242 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 PRR14Q9BWN1 585 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 TCEAL2Q9H3H9 227 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 KPTNQ9Y664 436 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 TSPAN11A1L157 253 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 RFPL4AA6NLU0 287 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 RFPL4AL1F8VTS6 287 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 PHYHO14832 338 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 IDSP22304 550 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 CLDN12P56749 244 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 KCNRGQ8N5I3 272 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 TMED6Q8WW62 240 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 CMSS1Q9BQ75 279 aaKnown RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 ASPDHA6ND91 283 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 STK17BO94768 372 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 BPIP17213 487 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 AMZ1Q400G9 498 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 FAM74A1Q5RGS3 127 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SFRP5Q5T4F7 317 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR5T1Q8NG75 326 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 DVL3Q92997 716 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 RAB3CQ96E17 227 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC25A21Q9BQT8 299 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 SUCNR1Q9BXA5 334 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC35A3Q9Y2D2 325 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 KNG1P01042 644 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZNF705AQ6ZN79 300 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZGRF1Q86YA3 2104 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR13C3Q8NGS6 347 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 B4GALT3O60512 393 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 NFATC4Q14934 902 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 PTCHD1Q96NR3 888 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ENKD1Q9H0I2 346 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 KIAA2026Q5HYC2 2103 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 LOC100289279A0A1B0GTE1 492 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 hCG_1809904A0A1W2PP81 198 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 A0A1W2PR64 198 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 A0A1W2PRV1 198 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 TLX3O43711 291 aaPredicted RBP7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR2T7P0C7T2 308 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC8B1Q6J4K2 584 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 POMZP3Q6PJE2 187 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR2T27Q8NH04 317 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 NDOR1Q9UHB4 597 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 CRYBA1P05813 215 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 CR2P20023 1033 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 IER5LQ5T953 404 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ZCCHC10Q8TBK6 192 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ACKR4Q9NPB9 350 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC7A7Q9UM01 511 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 ASB1Q9Y576 335 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 PREX1Q8TCU6 1659 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 DFFBO76075 338 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 FBXO45P0C2W1 286 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 LAP3P28838 519 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 SLC6A11P48066 632 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 CCL23P55773 120 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 OR56B1Q8NGI3 324 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 DLL4Q9NR61 685 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.36□□□□□ -1.23
SMG1-202ENST00000446231 MAGEB4O15481 346 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms