RNA–Protein interactions for RNA: ENST00000445889.5

ERCC3-203, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,920 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-203ENST00000445889 BLVRAP53004 296 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 RPS15P62841 145 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 EEF1A1P68104 462 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 RUNX2Q13950 521 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 LNX2Q8N448 690 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 HDDC3Q8N4P3 179 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 FAM98AQ8NCA5 519 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 CNOT9Q92600 299 aaKnown RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 RIT1Q92963 219 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 C10orf90Q96M02 699 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 ERMAPQ96PL5 475 aaPredicted RBP13.13□□□□□ -0.31
ERCC3-203ENST00000445889 C20orf85Q9H1P6 137 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 POT1Q9NUX5 634 aa13.13□□□□□ -0.31
ERCC3-203ENST00000445889 TEX51A0A1B0GUA7 166 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 RIIAD1A6NNX1 92 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 P2RX6O15547 441 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 SULT1A3P0DMM9 295 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 SULT1A4P0DMN0 295 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 NAT1P18440 290 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 NT5EP21589 574 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 LCN1P31025 176 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 BMP8BP34820 402 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 GDI2P50395 445 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 BDH1Q02338 343 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 NNATQ16517 81 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ODF4Q2M2E3 257 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 NDUFAF6Q330K2 333 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 BMP8AQ7Z5Y6 402 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 RANBP3LQ86VV4 465 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR52I2Q8NH67 350 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 PELI1Q96FA3 418 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 CA10Q9NS85 328 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 STARD5Q9NSY2 213 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 KCMF1Q9P0J7 381 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 HCN3Q9P1Z3 774 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 TRBV2A0A0J9YWF9 115 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 FLRT2O43155 660 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ANXA7P20073 488 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 GALP22466 123 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 CTNNB1P35222 781 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 RAD52P43351 418 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 MMP15P51511 669 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 UBE2MP61081 183 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 GAB4Q2WGN9 574 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 FCRLAQ7L513 359 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 COX18Q8N8Q8 333 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 TMEM52Q8NDY8 209 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR10G6Q8NH81 332 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 BRIX1Q8TDN6 353 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OTUB2Q96DC9 234 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ANKRD19PQ9H560 264 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 MAFFQ9ULX9 164 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 A0A1W2PPL8 197 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR2W5A6NFC9 320 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 SLC22A31A6NKX4 558 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 G3V3Q6 166 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ARPC1BO15143 372 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 RPP14O95059 124 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 CPMP14384 443 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 HIST1H1CP16403 213 aaKnown RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 GABRA3P34903 492 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 PLAURQ03405 335 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 DCST2Q5T1A1 773 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 SFRP5Q5T4F7 317 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 DMKNQ6E0U4 476 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 BTN2A1Q7KYR7 527 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 PXKQ7Z7A4 578 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 TPRA1Q86W33 373 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 TTLQ8NG68 377 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR4N2Q8NGD1 307 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR4K14Q8NGD5 310 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR6K6Q8NGW6 343 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 OR2L8Q8NGY9 312 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ZPLD1Q8TCW7 415 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 SNX33Q8WV41 574 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 SMARCD2Q92925 531 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
ERCC3-203ENST00000445889 MS4A4EQ96PG1 132 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 NOX4Q9NPH5 578 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 ACSL5Q9ULC5 683 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 MAB21L2Q9Y586 359 aa13.12□□□□□ -0.31
ERCC3-203ENST00000445889 DUXAA6NLW8 204 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 C1QTNF3-AMACRE9PGA6 284 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 SELENOFO60613 162 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 SIX6O95475 246 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 CEACAM5P06731 702 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 EDNRAP25101 427 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 MAP2K6P52564 334 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 RPE65Q16518 533 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 TCTE1Q5JU00 501 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 FAM78AQ5JUQ0 283 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 CLLU1Q5K131 121 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 ASPGQ86U10 573 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 CDK20Q8IZL9 346 aa13.11□□□□□ -0.31
ERCC3-203ENST00000445889 DNAAF1Q8NEP3 725 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms