RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 POP5Q969H6 163 aaKnown RBP15.54■□□□□ 0.08
LIME1-202ENST00000444951 C3orf49Q96BT1 292 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 DNAJA3Q96EY1 480 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 SLC41A3Q96GZ6 507 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 MRGPRX4Q96LA9 322 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 ZNF300Q96RE9 604 aaPredicted RBP15.54■□□□□ 0.08
LIME1-202ENST00000444951 FNDC11Q9BVV2 318 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 CHID1Q9BWS9 393 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 MAGIXQ9H6Y5 334 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 IL1RAPQ9NPH3 570 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 RIMS3Q9UJD0 308 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 SLC7A7Q9UM01 511 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 MRPS18CQ9Y3D5 142 aaKnown RBP15.54■□□□□ 0.08
LIME1-202ENST00000444951 ZNF337Q9Y3M9 751 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 TESMINQ9Y4I5 508 aa15.54■□□□□ 0.08
LIME1-202ENST00000444951 PCNX1Q96RV3 2341 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 APCP25054 2843 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 TMED7-TICAM2A0A0A6YYA0 188 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 TRAPPC13A5PLN9 417 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 ELOA3DA6NLF2 546 aaPredicted RBP15.53■□□□□ 0.08
LIME1-202ENST00000444951 FKBP6O75344 327 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 NTN1O95631 604 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 ITGA2P17301 1181 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 EIF1P41567 113 aaKnown RBP15.53■□□□□ 0.08
LIME1-202ENST00000444951 B3GALT5-AS1P59052 145 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 ELOA3BQ3SY89 546 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 GLYR1Q49A26 553 aaPredicted RBP15.53■□□□□ 0.08
LIME1-202ENST00000444951 ULK3Q6PHR2 472 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 TRILQ7L0X0 811 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 GDF7Q7Z4P5 450 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 LSMEM1Q8N8F7 131 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 ELOA3Q8NG57 546 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 NEIL3Q8TAT5 605 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 PHF10Q8WUB8 498 aaKnown RBP15.53■□□□□ 0.08
LIME1-202ENST00000444951 PYDC1Q8WXC3 89 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 SLCO4A1Q96BD0 722 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 PRRC1Q96M27 445 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 ACKR4Q9NPB9 350 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 OSGIN1Q9UJX0 560 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 A4GNTQ9UNA3 340 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 TMED7Q9Y3B3 224 aa15.53■□□□□ 0.08
LIME1-202ENST00000444951 CSMD2Q7Z408 3487 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 A0A0B4J2E0 115 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 A0A1B0GTH9 108 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 A0A1B0GX12 115 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 FFAR1O14842 300 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 TIPRLO75663 272 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 OR5F1O95221 314 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 THY1P04216 161 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 TFPIP10646 304 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 RHCEP18577 417 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 POU3F2P20265 443 aaPredicted RBP15.52■□□□□ 0.08
LIME1-202ENST00000444951 FUT4P22083 530 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 IFNA8P32881 189 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 SFTPDP35247 375 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.08
LIME1-202ENST00000444951 HTR3AP46098 478 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 PER3P56645 1201 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 SPIBQ01892 262 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 AAGABQ6PD74 315 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 ZNF613Q6PF04 617 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 ADGRG3Q86Y34 549 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 P3H2Q8IVL5 708 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 UBQLNLQ8IYU4 475 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 OR52J3Q8NH60 311 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 DNAJA4Q8WW22 397 aaPredicted RBP15.52■□□□□ 0.08
LIME1-202ENST00000444951 ABTB1Q969K4 478 aaPredicted RBP15.52■□□□□ 0.08
LIME1-202ENST00000444951 GPR137Q96N19 417 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 PIP5K1AQ99755 562 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 ADAM19Q9H013 955 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 SERINC1Q9NRX5 453 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 CCM2LQ9NUG4 571 aaPredicted RBP15.52■□□□□ 0.08
LIME1-202ENST00000444951 SPRR3Q9UBC9 169 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 AP4S1Q9Y587 144 aa15.52■□□□□ 0.08
LIME1-202ENST00000444951 TMEM72A0PK05 275 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 C7orf72A4D263 438 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 SEC14L5O43304 696 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 EFNA2O43921 213 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 SUSD5O60279 629 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 IGHG3P01860 377 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 ZNF17P17021 662 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 BMP7P18075 431 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 GRNP28799 593 aaKnown RBP15.51■□□□□ 0.07
LIME1-202ENST00000444951 SLC7A1P30825 629 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 GFRA1P56159 465 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 SRYQ05066 204 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 C3AR1Q16581 482 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 TMEM44Q2T9K0 475 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 IQCCQ4KMZ1 466 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 SLC25A53Q5H9E4 307 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 FGD3Q5JSP0 725 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 DCST1Q5T197 706 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 GFRALQ6UXV0 394 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 ATG4DQ86TL0 474 aaPredicted RBP15.51■□□□□ 0.07
LIME1-202ENST00000444951 LILRA2Q8N149 483 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 STMN2Q93045 179 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 ZNF347Q96SE7 839 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 OR11A1Q9GZK7 315 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 YY1AP1Q9H869 796 aa15.51■□□□□ 0.07
LIME1-202ENST00000444951 CHRNA9Q9UGM1 479 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms