RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 PRRC1Q96M27 445 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 SYT17Q9BSW7 474 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 DERL1Q9BUN8 251 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 DUSP16Q9BY84 665 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 HMGXB3Q12766 1538 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 TBC1D3KA0A087X1G2 549 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 OR2A25A4D2G3 310 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 A6NNC1 897 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 DVL1O14640 695 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 ERAL1O75616 437 aaKnown RBP5.24□□□□□ -1.57
PTPRC-209ENST00000442510 ALPPL2P10696 532 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 NPY1RP25929 384 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 NTSP30990 170 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 HOXC5Q00444 222 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 TRA2AQ13595 282 aaKnown RBP eCLIP5.24□□□□□ -1.57
PTPRC-209ENST00000442510 TTC32Q5I0X7 151 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 PPM1JQ5JR12 505 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 ATAT1Q5SQI0 421 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 MRNIPQ6NTE8 343 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 MON1BQ7L1V2 547 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 SLC38A9Q8NBW4 561 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 OR1S2Q8NGQ3 325 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 SNX22Q96L94 193 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 TBX15Q96SF7 602 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 ADAT1Q9BUB4 502 aaKnown RBP5.24□□□□□ -1.57
PTPRC-209ENST00000442510 XYLT2Q9H1B5 865 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 C20orf85Q9H1P6 137 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 FBXO44Q9H4M3 255 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 ZNF302Q9NR11 478 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 DLL4Q9NR61 685 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 DOK5Q9P104 306 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 HSPB7Q9UBY9 170 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 KCNG2Q9UJ96 466 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 ZDHHC8Q9ULC8 765 aa5.24□□□□□ -1.57
PTPRC-209ENST00000442510 C19orf53Q9UNZ5 99 aaPredicted RBP5.24□□□□□ -1.57
PTPRC-209ENST00000442510 SEPT4O43236 478 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 PRICKLE3O43900 615 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 FGF3P11487 239 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 GABRA1P14867 456 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ACHEP22303 614 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 PCSK1P29120 753 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 RBMS1P29558 406 aaKnown RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 F2RL1P55085 397 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 OR4D2P58180 307 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 C17orf67Q0P5P2 114 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 RAB35Q15286 201 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ACOT6Q3I5F7 207 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 FBLN7Q53RD9 439 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 USP17L6PQ6QN14 398 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 RTN4RL2Q86UN3 420 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ZFP41Q8N8Y5 198 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 C19orf47Q8N9M1 422 aaKnown RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 OR8J3Q8NGG0 315 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ROBO4Q8WZ75 1007 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 OR1E3Q8WZA6 343 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 RCC1LQ96I51 464 aaKnown RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 HHIPQ96QV1 700 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 CDCA3Q99618 268 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 MARVELD1Q9BSK0 173 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 PECRQ9BY49 303 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 C12orf49Q9H741 205 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 AKIRIN1Q9H9L7 192 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 RAB22AQ9UL26 194 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 KLF2Q9Y5W3 355 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 A0A0G2JLW4 131 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 SELENOFO60613 162 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 VIPP01282 170 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 DRD1P21728 446 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 C21orf33P30042 268 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 WNT5AP41221 380 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 UQCRFS1P47985 274 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 RFX3P48380 749 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 LHX1P48742 406 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 DMWDQ09019 674 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ELAVL2Q12926 359 aaKnown RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 LAPTM4AQ15012 233 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 AWAT1Q58HT5 328 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 REEP3Q6NUK4 255 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 LBX2Q6XYB7 198 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 PDZD3Q86UT5 571 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 TSEN15Q8WW01 171 aaKnown RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 TMED6Q8WW62 240 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 TMEM159Q96B96 161 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 YIPF6Q96EC8 236 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 PYURFQ96I23 114 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 KIRREL1Q96J84 757 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 TEPSINQ96N21 525 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 CSF3RQ99062 836 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ATP6V0BQ99437 205 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 KLHDC3Q9BQ90 382 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ANAPC13Q9BS18 74 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ACSS2Q9NR19 701 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 FBXO34Q9NWN3 711 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 ABI3Q9P2A4 366 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 TIMM8BQ9Y5J9 83 aaPredicted RBP5.23□□□□□ -1.57
PTPRC-209ENST00000442510 LIPGQ9Y5X9 500 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 TSPAN11A1L157 253 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 C7orf77A4D0Y5 90 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 OR52A4PA6NMU1 304 aa5.23□□□□□ -1.57
PTPRC-209ENST00000442510 A8MVM7 634 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms