RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 FBXL7Q9UJT9 491 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 GPR25O00155 361 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CNIH1O95406 144 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 BMP3P12645 472 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CD82P27701 267 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 NPBWR2P48146 333 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 MAZP56270 477 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TRIP10Q15642 601 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CARTPTQ16568 116 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CPSF6Q16630 551 aaKnown RBP eCLIP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 GCSAMLQ5JQS6 135 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PMS2CLQ68D20 193 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TYW3Q6IPR3 259 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 FAM90A1Q86YD7 464 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CDRT4Q8N9R6 151 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 OR51A7Q8NH64 312 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CD200R1Q8TD46 325 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 STMN2Q93045 179 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PTH2Q96A98 100 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ARSGQ96EG1 525 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PPP3R2Q96LZ3 170 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 DPH2Q9BQC3 489 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SIK2Q9H0K1 926 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ING2Q9H160 280 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ANKRD19PQ9H560 264 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 LDAHQ9H6V9 325 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 UGT2A1Q9Y4X1 527 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 BRCA2P51587 3418 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 A0A1W2PQ45 241 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 A0A1W2PQY0 241 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PSTPIP1O43586 416 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PCDH7O60245 1069 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 LILRA1O75019 489 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 RGS11O94810 467 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 VAPBO95292 243 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SCGB1A1P11684 91 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SLC2A4P14672 509 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 FAM3BP58499 235 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 RPL19P84098 196 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SORDQ00796 357 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 FAM214AQ32MH5 1076 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CXorf66Q5JRM2 361 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SPIN3Q5JUX0 258 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 IGFN1Q86VF2 1251 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF683Q8IZ20 524 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TMEM161BQ8NDZ6 487 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PHF10Q8WUB8 498 aaKnown RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SUSD6Q92537 303 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SMARCD2Q92925 531 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 TXNDC15Q96J42 360 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF512Q96ME7 567 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ZNF599Q96NL3 588 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 AMDHD1Q96NU7 426 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CUTCQ9NTM9 273 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SEMA4GQ9NTN9 838 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 CACNA2D2Q9NY47 1150 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 VNN3Q9NY84 501 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 WRAP73Q9P2S5 460 aaPredicted RBP9.69□□□□□ -0.86
SYNE2-206ENST00000441438 PRSS50Q9UI38 385 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 ZDHHC2Q9UIJ5 367 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 FZD1Q9UP38 647 aa9.69□□□□□ -0.86
SYNE2-206ENST00000441438 SLC38A8A6NNN8 435 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 H0Y980 276 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 IMPA2O14732 288 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 LRIG2O94898 1065 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 NR3C1P04150 777 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 CPN1P15169 458 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 GLB1P16278 677 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 GABRR1P24046 479 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 UQCRC1P31930 480 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 CSNK1A1P48729 337 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 UGT2B15P54855 530 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 CD69Q07108 199 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 MGAT2Q10469 447 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 NFATC4Q14934 902 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 OR8G1Q15617 311 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 RNASE10Q5GAN6 216 aaKnown RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 PLAG1Q6DJT9 500 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ESPNLQ6ZVH7 1005 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ERI1Q8IV48 349 aaKnown RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 OR1L4Q8NGR5 311 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 MAFAQ8NHW3 353 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ZBED6CLQ96FA7 236 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 TCTN2Q96GX1 697 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 CNN2Q99439 309 aaKnown RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ECSITQ9BQ95 431 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 hCG_38984A0A1B0GV85 526 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 PDXKO00764 312 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 NBR2O15453 112 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 MAGEB4O15481 346 aaPredicted RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 LAMTOR5O43504 91 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 LATO43561 262 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 MMP20O60882 483 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 SOX30O94993 753 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 MPIG6BO95866 241 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 VIPP01282 170 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 TPH1P17752 444 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 ATP5A1P25705 553 aaKnown RBP9.68□□□□□ -0.86
SYNE2-206ENST00000441438 MC2RQ01718 297 aa9.68□□□□□ -0.86
SYNE2-206ENST00000441438 BTN1A1Q13410 526 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 186.1 ms