RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 SPIN2AQ99865 258 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 SPIN2BQ9BPZ2 258 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 GINS3Q9BRX5 216 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 MAGED1Q9Y5V3 778 aaPredicted RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 GABRR3A8MPY1 467 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 ZNF705GA8MUZ8 300 aaPredicted RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 WASH4PA8MWX3 477 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 ARPC1BO15143 372 aaKnown RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 OR7C1O76099 320 aaPredicted RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 VEGFCP49767 419 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 AKR1C1Q04828 323 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 ACSM3Q53FZ2 586 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 TANGO2Q6ICL3 276 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 SGK3Q96BR1 496 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 SLC45A3Q96JT2 553 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 SLC6A18Q96N87 628 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 BTBD2Q9BX70 525 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 GNG12Q9UBI6 72 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 HTR3AP46098 478 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 OR5AS1Q8N127 324 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 MIB2Q96AX9 1013 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 CMSS1Q9BQ75 279 aaKnown RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 EGLN3Q9H6Z9 239 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 SLC6A5Q9Y345 797 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 NID2Q14112 1375 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 EGFP01133 1207 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 P2RX1P51575 399 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 ATP1B3P54709 279 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 CLDN6P56747 220 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 DCDP81605 110 aaKnown RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 HNRNPA1L2Q32P51 320 aaKnown RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 DPPA4Q7L190 304 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 ZNF566Q969W8 418 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 SGPP1Q9BX95 441 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 QRSL1Q9H0R6 528 aaKnown RBP12.88□□□□□ -0.35
LRCH3-206ENST00000438796 MYH7BA7E2Y1 1941 aa12.88□□□□□ -0.35
LRCH3-206ENST00000438796 ZNF891A8MT65 544 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 MINDY1Q8N5J2 469 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 OR4A16Q8NH70 328 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 KLF16Q9BXK1 252 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 FJX1Q86VR8 437 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SUMF2Q8NBJ7 301 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SAP130Q9H0E3 1048 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 CDCP1Q9H5V8 836 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 TSPAN11A1L157 253 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 MTCP1P56278 107 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 WNT4P56705 351 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 CARD18P57730 90 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 PCBD1P61457 104 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 WBP2NLQ6ICG8 309 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 MS4A15Q8N5U1 240 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 C19orf47Q8N9M1 422 aaKnown RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 MYOTQ9UBF9 498 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 PIK3C2AO00443 1686 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SURF4O15260 269 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 PAHP00439 452 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 MRPL43Q8N983 215 aaKnown RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SECTM1Q8WVN6 248 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SNAPC3Q92966 411 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 PRDM4Q9UKN5 801 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 PRAMEF4O60810 478 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 DDAH2O95865 285 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 PRDX3P30048 256 aaKnown RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 WNT7BP56706 349 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 TNK1Q13470 666 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 AGBL5Q8NDL9 886 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 OR7G2Q8NG99 324 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 CLSTN3Q9BQT9 956 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SLC38A1Q9H2H9 487 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 HRH4Q9H3N8 390 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 ACOT13Q9NPJ3 140 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 DNMT3BQ9UBC3 853 aaKnown RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 C1orf196B1AJZ1 125 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 H0YGG7 62 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 FAM189A1O60320 539 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 ZNF623O75123 536 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 BAXQ07812 192 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 ZNF468Q5VIY5 522 aaPredicted RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 SLC22A10Q63ZE4 541 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 AAED1Q7RTV5 226 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 BHLHE23Q8NDY6 225 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 BEST4Q8NFU0 473 aa12.87□□□□□ -0.35
LRCH3-206ENST00000438796 WDR83Q9BRX9 315 aaKnown RBP12.87□□□□□ -0.35
LRCH3-206ENST00000438796 E9PI62 339 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 GABRA5P31644 462 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 RAD52P43351 418 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 B3GNT7Q8NFL0 401 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 NAT6Q93015 286 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 L3HYPDHQ96EM0 354 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 ELMOD3Q96FG2 381 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 NICN1Q9BSH3 213 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 TMEM9Q9P0T7 183 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 HCFC2Q9Y5Z7 792 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 CACNG2Q9Y698 323 aa12.86□□□□□ -0.35
LRCH3-206ENST00000438796 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms