RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 BCO1Q9HAY6 547 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 YAE1D1Q9NRH1 226 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 GPATCH2Q9NW75 528 aa6.88□□□□□ -1.31
VPS50-204ENST00000438395 MAGED1Q9Y5V3 778 aaPredicted RBP6.88□□□□□ -1.31
VPS50-204ENST00000438395 ZNF724A8MTY0 619 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 GPR171O14626 319 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 ABCD4O14678 606 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SMAD9O15198 467 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 TLX2O43763 284 aaPredicted RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 CYTIPO60759 359 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SPAG7O75391 227 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 UQCRBP14927 111 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 MATN1P21941 496 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 CHI3L1P36222 383 aaPredicted RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 ACVR1BP36896 505 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 DIO1P49895 249 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 KHKP50053 298 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 ANXA11P50995 505 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 SESN3P58005 492 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SKP2Q13309 424 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 GNA13Q14344 377 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SYT14P1Q58G82 188 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SLC25A53Q5H9E4 307 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 EXOSC6Q5RKV6 272 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 TIMM23BQ5SRD1 257 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 KLHL24Q6TFL4 600 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 CLEC2AQ6UVW9 174 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 KIRREL3Q8IZU9 778 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 FBXL14Q8N1E6 418 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 MAPK1IP1LQ8NDC0 245 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 OR5D16Q8NGK9 328 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 PSMA8Q8TAA3 256 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 PIGXQ8TBF5 258 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 IGFBPL1Q8WX77 278 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 COQ8BQ96D53 544 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SDF2Q99470 211 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 KLHDC3Q9BQ90 382 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 PSD2Q9BQI7 771 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 THUMPD3Q9BV44 507 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 LAT2Q9GZY6 243 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SLCO5A1Q9H2Y9 848 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 C7orf69Q9H7B7 122 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 ANKZF1Q9H8Y5 726 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 CACYBPQ9HB71 228 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 CISD1Q9NZ45 108 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 SLC17A7Q9P2U7 560 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 MGAT4BQ9UQ53 548 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 SLC35A3Q9Y2D2 325 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 NOSIPQ9Y314 301 aaKnown RBP6.87□□□□□ -1.31
VPS50-204ENST00000438395 WDR45Q9Y484 360 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 KCNE3Q9Y6H6 103 aa6.87□□□□□ -1.31
VPS50-204ENST00000438395 OR5H1A6NKK0 313 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 RNF212BA8MTL3 300 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 C9JVG2 144 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 NPIPB9F8W1W9 429 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 EFNA2O43921 213 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 SSX4O60224 188 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 MRPL33O75394 65 aaKnown RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 RAD51DO75771 328 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 H6PDO95479 791 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 IGLV1-40P01703 118 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 IGHV3-9P01782 118 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 MYZAPP0CAP1 466 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 DHRS4L1P0CG22 281 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 G6PDP11413 515 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 FKBP2P26885 142 aaKnown RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 RYKP34925 604 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 APOBEC1P41238 236 aaKnown RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 ZNF83P51522 516 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 C21orf58P58505 322 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 DSCR9P59020 149 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 HBA1P69905 142 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 TGFBR3Q03167 851 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 CHRNEQ04844 493 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ZNF141Q15928 474 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 PDCD2Q16342 344 aaPredicted RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 UGT3A2Q3SY77 523 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ANXA8L1Q5VT79 327 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 FBXW9Q5XUX1 488 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 TNFAIP8L2Q6P589 184 aaPredicted RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 CASP12Q6UXS9 341 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 TMPPEQ6ZT21 453 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 CXXC5Q7LFL8 322 aaKnown RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 C6orf120Q7Z4R8 191 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 NUDCD3Q8IVD9 361 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ARFGAP2Q8N6H7 521 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 OR52N5Q8NH56 324 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 TCP10LQ8TDR4 215 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 XAGE5Q8WWM1 108 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 OIT3Q8WWZ8 545 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 NEUROG1Q92886 237 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 PPP1R36Q96LQ0 422 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ZNF300Q96RE9 604 aaPredicted RBP6.86□□□□□ -1.31
VPS50-204ENST00000438395 DPY30Q9C005 99 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 TRIM2Q9C040 744 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ZNF350Q9GZX5 532 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 FKRPQ9H9S5 495 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 POLE3Q9NRF9 147 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ACER3Q9NUN7 267 aa6.86□□□□□ -1.31
VPS50-204ENST00000438395 ASB6Q9NWX5 421 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms