RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 LCN1P31025 176 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 RGS21Q2M5E4 152 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 WBP2NLQ6ICG8 309 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 SMARCD3Q6STE5 483 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 LINC00299Q6ZSB3 139 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 LRRC17Q8N6Y2 441 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 CLDN22Q8N7P3 220 aa19.29■□□□□ 0.68
PTPRF-207ENST00000436724 BRIX1Q8TDN6 353 aaKnown RBP19.29■□□□□ 0.68
PTPRF-207ENST00000436724 EFCAB10A6NFE3 127 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 WISP1O95388 367 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 CELA2AP08217 269 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 ITPKBP27987 946 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 PCOLCEQ15113 449 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 DGUOKQ16854 277 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 OAFQ86UD1 273 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 ZNF563Q8TA94 476 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 LGALS12Q96DT0 336 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 TNFRSF13CQ96RJ3 184 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 STRADBQ9C0K7 418 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 LAT2Q9GZY6 243 aa19.28■□□□□ 0.68
PTPRF-207ENST00000436724 CNOT2Q9NZN8 540 aaKnown RBP19.28■□□□□ 0.68
PTPRF-207ENST00000436724 IGKV1D-42A0A075B6H8 117 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 A0A1W2PNU3 283 aaPredicted RBP19.27■□□□□ 0.68
PTPRF-207ENST00000436724 A0A1W2PQD3 144 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 FUOMA2VDF0 154 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 C2orf72A6NCS6 295 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 PPM1BO75688 479 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 PTHP01270 115 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 CD36P16671 472 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 TGFBR1P36897 503 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 FHL1Q13642 323 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 BTBD16Q32M84 506 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 SLC35F1Q5T1Q4 408 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 HMG20AQ9NP66 347 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 TOR4AQ9NXH8 423 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 ICAM5Q9UMF0 924 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 EXPH5Q8NEV8 1989 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 KNTC1P50748 2209 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 BHLHE40O14503 412 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 ADAM10O14672 748 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 PTP4A3O75365 173 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 CSO75390 466 aaKnown RBP19.27■□□□□ 0.68
PTPRF-207ENST00000436724 APOL3O95236 402 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 NUDT14O95848 222 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 BMP7P18075 431 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 TBCEQ15813 527 aaPredicted RBP19.27■□□□□ 0.68
PTPRF-207ENST00000436724 SLC25A30Q5SVS4 291 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 PLAG1Q6DJT9 500 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 OR5M10Q6IEU7 315 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 DHRS13Q6UX07 377 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 ATG4DQ86TL0 474 aaPredicted RBP19.27■□□□□ 0.68
PTPRF-207ENST00000436724 OR52L1Q8NGH7 329 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 OR6Q1Q8NGQ2 317 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 RPL36Q9Y3U8 105 aaKnown RBP19.27■□□□□ 0.68
PTPRF-207ENST00000436724 HS3ST3B1Q9Y662 390 aa19.27■□□□□ 0.68
PTPRF-207ENST00000436724 PCNX2A6NKB5 2137 aa19.27■□□□□ 0.67
PTPRF-207ENST00000436724 FAM183AA6NL82 134 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 ELOA3DA6NLF2 546 aaPredicted RBP19.26■□□□□ 0.67
PTPRF-207ENST00000436724 M0R082 166 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 JMJD7P0C870 316 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 ADORA3P0DMS8 318 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 LIPAP38571 399 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 ELOA3BQ3SY89 546 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 TIPARPQ7Z3E1 657 aaKnown RBP19.26■□□□□ 0.67
PTPRF-207ENST00000436724 MFSD4AQ8N468 514 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 ANKK1Q8NFD2 765 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 ELOA3Q8NG57 546 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 OR2Y1Q8NGV0 311 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 DUSP19Q8WTR2 217 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 WDR12Q9GZL7 423 aaKnown RBP19.26■□□□□ 0.67
PTPRF-207ENST00000436724 PARD6AQ9NPB6 346 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 MYOTQ9UBF9 498 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 DMXL1Q9Y485 3027 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 LOC102723996A0A087X1L8 192 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 OR2J2O76002 312 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 ZFAND5O76080 213 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 RCBTB2O95199 551 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 RPS18P62269 152 aaKnown RBP19.26■□□□□ 0.67
PTPRF-207ENST00000436724 GXYLT1Q4G148 440 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 MEDAGQ5VYS4 303 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 BICRALQ6AI39 1079 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 FCRLBQ6BAA4 426 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 POMZP3Q6PJE2 187 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 BBS1Q8NFJ9 593 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 S100ZQ8WXG8 99 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 IFT27Q9BW83 186 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 MCCC2Q9HCC0 563 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 GALNT9Q9HCQ5 603 aa19.26■□□□□ 0.67
PTPRF-207ENST00000436724 CELSR3Q9NYQ7 3312 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 IGHV1-45A0A0A0MS14 117 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 MASP2O00187 686 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 PIPP12273 146 aaPredicted RBP19.25■□□□□ 0.67
PTPRF-207ENST00000436724 TACR3P29371 465 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 SLC1A3P43003 542 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 IFITM3Q01628 133 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 DOC2BQ14184 412 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 IRF3Q14653 427 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 ADCK1Q86TW2 530 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 OR5L2Q8NGL0 311 aa19.25■□□□□ 0.67
PTPRF-207ENST00000436724 OR8K3Q8NH51 312 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms