RNA–Protein interactions for RNA: ENST00000435083.5

CHRNA1-207, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3

Gene CHRNA1, Length 1,596 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-207ENST00000435083 CTPS2Q9NRF8 586 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 UPB1Q9UBR1 384 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 MALT1Q9UDY8 824 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 GIMAP2Q9UG22 337 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 KCNE5Q9UJ90 142 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 MKLN1Q9UL63 735 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 MOKQ9UQ07 419 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 AMDHD2Q9Y303 409 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 DNAJC15Q9Y5T4 150 aa10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 SPIN1Q9Y657 262 aaPredicted RBP10.16□□□□□ -0.78
CHRNA1-207ENST00000435083 IGHV4-61A0A0C4DH41 118 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 DNAJA2O60884 412 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 PGRP06401 933 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 MAPK1P28482 360 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 SOAT1P35610 550 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 MAGEA8P43361 318 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 CCT5P48643 541 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 OR2B6P58173 313 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 RPS26P62854 115 aaKnown RBP10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 SLC25A3Q00325 362 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 ZNF141Q15928 474 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 RNF165Q6ZSG1 346 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 ZNF563Q8TA94 476 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 PSMA8Q8TAA3 256 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 SFXN5Q8TD22 340 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 MOAP1Q96BY2 351 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 VRK1Q99986 396 aaPredicted RBP10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 NMUR2Q9GZQ4 415 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 ATAD3AQ9NVI7 634 aa10.15□□□□□ -0.78
CHRNA1-207ENST00000435083 NUP214P35658 2090 aaPredicted RBP10.15□□□□□ -0.79
CHRNA1-207ENST00000435083 CENPVL1A0A0U1RR11 272 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 ZNF500O60304 480 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 FCMRO60667 390 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PEX11AO75192 247 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 STX11O75558 287 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PMS2P2O95744 297 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 CCNA2P20248 432 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 MATN1P21941 496 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 RYKP34925 604 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 APOBEC1P41238 236 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PRPS1P60891 318 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 RUNX1T1Q06455 604 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 SWI5Q1ZZU3 235 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 MST1LQ2TV78 715 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 CR1LQ2VPA4 569 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 KANK2Q63ZY3 851 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 EIF3MQ7L2H7 374 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 C10orf107Q8IVU9 208 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 C17orf78Q8N4C9 275 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 TWIST2Q8WVJ9 160 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 GATA5Q9BWX5 397 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 OR11A1Q9GZK7 315 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 SLC7A10Q9NS82 523 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 CHRNA9Q9UGM1 479 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 DCTN4Q9UJW0 460 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 ARFGEF3Q5TH69 2177 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 LOC390937A0A1W2PQ73 354 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 DUXAA6NLW8 204 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 TMEM233B4DJY2 109 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PIP5K1BO14986 540 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 ANKRD28O15084 1053 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 UGT2B17O75795 530 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 CDH2P19022 906 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 CRHR1P34998 444 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 SLC16A1P53985 500 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 SNRPD2P62316 118 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 TGFBR3Q03167 851 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PTGR1Q14914 329 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 TSPO2Q5TGU0 170 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 BHLHB9Q6PI77 547 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 KLHL24Q6TFL4 600 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 C16orf62Q7Z3J2 963 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 SLC46A3Q7Z3Q1 461 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 KRTCAP2Q8N6L1 136 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 NATD1Q8N6N6 113 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 ANKS4BQ8N8V4 417 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 C1orf162Q8NEQ5 155 aaPredicted RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 COQ8BQ96D53 544 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 C1orf159Q96HA4 380 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PPP3R2Q96LZ3 170 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PRPF18Q99633 342 aaKnown RBP10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 C1orf50Q9BV19 199 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 CCDC106Q9BWC9 280 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PARPBPQ9NWS1 579 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 HDGFL3Q9Y3E1 203 aa10.14□□□□□ -0.79
CHRNA1-207ENST00000435083 PDLIM1O00151 329 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 COPEO14579 308 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 KLF11O14901 512 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 DNPH1O43598 174 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 TCF21O43680 179 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 WNT11O96014 354 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 AK1P00568 194 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 CHRNGP07510 517 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 ZNF23P17027 643 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 SRP14P37108 136 aaKnown RBP10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 HBA1P69905 142 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 ARHGAP11BQ3KRB8 267 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 C6orf120Q7Z4R8 191 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 ADGRG3Q86Y34 549 aa10.13□□□□□ -0.79
CHRNA1-207ENST00000435083 CNPY4Q8N129 248 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms