RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 NUP54Q7Z3B4 507 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 PIWIL3Q7Z3Z3 882 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 COMTD1Q86VU5 262 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 GRAMD2AQ8IUY3 354 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 MISPQ8IVT2 679 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 ZNF440Q8IYI8 595 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 CYP4Z2PQ8N1L4 340 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 GALNT16Q8N428 558 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 DTX3Q8N9I9 347 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 GATSQ8NAP1 163 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 POGLUT1Q8NBL1 392 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 LSM14AQ8ND56 463 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 ICA1LQ8NDH6 482 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 FAM71CQ8NEG0 241 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 OR10G3Q8NGC4 313 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 OR6T1Q8NGN1 323 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 OR5M3Q8NGP4 307 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 OR2T29Q8NH02 315 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 OR4C3Q8NH37 302 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 APOBEC4Q8WW27 367 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 LRTOMTQ8WZ04 291 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 HGDQ93099 445 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 SDCCAG3Q96C92 435 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 ZG16BQ96DA0 208 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 MBD6Q96DN6 1003 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 C7orf34Q96L11 122 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 PRRC1Q96M27 445 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 BBC3Q96PG8 261 aaPredicted RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 SECISBP2Q96T21 854 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 PKP2Q99959 881 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 OSBPL11Q9BXB4 747 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 AMBRA1Q9C0C7 1298 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 POLR2J2Q9GZM3 115 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 POLR2J3Q9H1A7 115 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 VCX3BQ9H321 246 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 METTL7AQ9H8H3 244 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 REEP1Q9H902 201 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 ZBTB20Q9HC78 741 aaPredicted RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 CPNE5Q9HCH3 593 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 HHATLQ9HCP6 504 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 EXOSC3Q9NQT5 275 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 DLL4Q9NR61 685 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 HPF1Q9NWY4 346 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 GPR83Q9NYM4 423 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 FLRT3Q9NZU0 649 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 NDUFAF4Q9P032 175 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 DNAJB9Q9UBS3 223 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 FAM32AQ9Y421 112 aaKnown RBP6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 ENPP4Q9Y6X5 453 aa6.28□□□□□ -1.4
GTF2A1-202ENST00000434192 BSNQ9UPA5 3926 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 K7ENP7 123 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 GTPBP1O00178 669 aaKnown RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CLOCKO15516 846 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 NKX2-8O15522 239 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 ZNF264O43296 627 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 FRS3O43559 492 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 HCRTR2O43614 444 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 FADS1O60427 444 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 FMO6PO60774 539 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 DIRAS1O95057 198 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 ANGPTL1O95841 491 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 ZNF23P17027 643 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 RHCEP18577 417 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 RRM2P31350 389 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 SLC6A8P48029 635 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CCR4P51679 360 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 TAS2R41P59536 307 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 OC90Q02509 493 aaPredicted RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 SKP2Q13309 424 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 SNTA1Q13424 505 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 GK3PQ14409 553 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 GANABQ14697 944 aaKnown RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CD226Q15762 336 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 NPTX1Q15818 432 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 ZNF791Q3KP31 576 aaPredicted RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 KLHL26Q53HC5 615 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 FGD3Q5JSP0 725 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 FNDC7Q5VTL7 733 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CD276Q5ZPR3 534 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 B3GNTL1Q67FW5 361 aaPredicted RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 HMBOX1Q6NT76 420 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 TMEM81Q6P7N7 255 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 INO80CQ6PI98 192 aaPredicted RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 IL20RBQ6UXL0 311 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 RTL4Q6ZR62 310 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 LACC1Q8IV20 430 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 OFCC1Q8IZS5 231 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 BEST3Q8N1M1 668 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CLIP4Q8N3C7 705 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CATSPER1Q8NEC5 780 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 NUDT10Q8NFP7 164 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 TOR1AIP2Q8NFQ8 470 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 OR4D11Q8NGI4 311 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 GRHL3Q8TE85 626 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 PHF10Q8WUB8 498 aaKnown RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 RNF138Q8WVD3 245 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 EME1Q96AY2 570 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 NUDT11Q96G61 164 aa6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 CENPNQ96H22 339 aaPredicted RBP6.27□□□□□ -1.41
GTF2A1-202ENST00000434192 C8orf49Q96NF6 230 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms