RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SERPINA3P01011 423 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4L2P0CJ85 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4L3P0CJ86 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4L4P0CJ87 422 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4L5P0CJ88 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4L6P0CJ89 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4L7P0CJ90 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 CPN1P15169 458 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 MAKP20794 623 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 MST1P26927 711 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 GABRR2P28476 465 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 PDX1P52945 283 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 MAT1AQ00266 395 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 SERTAD2Q14140 314 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 PABPC1L2AQ5JQF8 200 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 FAM46CQ5VWP2 391 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 SEZ6L2Q6UXD5 910 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 FAM129CQ86XR2 697 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 LINC00469Q8N7U9 141 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR5T2Q8NGG2 359 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR2A12Q8NGT7 310 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 PNPLA2Q96AD5 504 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 BCL2L10Q9HD36 194 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 LHX9Q9NQ69 397 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 ACSS1Q9NUB1 689 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DUX4Q9UBX2 424 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 NAP1L6A6NFF2 107 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 LCMT2O60294 686 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR2A4O95047 310 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 RASGRP1O95267 797 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 GRPRP30550 384 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 PTH2RP49190 550 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DHODHQ02127 395 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 SWI5Q1ZZU3 235 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 DMKNQ6E0U4 476 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 TMEM150AQ86TG1 271 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 METTL3Q86U44 580 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 TMEM17Q86X19 198 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 NAXDQ8IW45 347 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 NUP43Q8NFH3 380 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF461Q8TAF7 563 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 ADAMTS15Q8TE58 950 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 KISS1RQ969F8 398 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 HS6ST2Q96MM7 605 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 CASD1Q96PB1 797 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR2A7Q96R45 310 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 SPG21Q9NZD8 308 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 USP36Q9P275 1121 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 TRAV20A0A0B4J274 112 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 RIIAD1A6NNX1 92 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 PPP1R3DO95685 299 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 ASGR2P07307 311 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 SRMP19623 302 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 NT5EP21589 574 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 CDK2P24941 298 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 P2RX1P51575 399 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 CBFBQ13951 182 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 STPG1Q5TH74 334 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 YOD1Q5VVQ6 348 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 BAIAP2L2Q6UXY1 529 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF546Q86UE3 836 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 MCATQ8IVS2 390 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 GJD3Q8N144 294 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 MUC20Q8N307 709 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR9A2Q8NGT5 310 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 STK35Q8TDR2 534 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 NSMAFQ92636 917 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 GAL3ST1Q99999 423 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 CMSS1Q9BQ75 279 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF471Q9BX82 626 aaPredicted RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 GPR174Q9BXC1 333 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 CPEB1Q9BZB8 566 aaKnown RBP10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 MOKQ9UQ07 419 aa10.68□□□□□ -0.7
HMGCS1-202ENST00000433297 OR6C65A6NJZ3 312 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 IDSB3KWA1 339 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 KPNA3O00505 521 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ABCD4O14678 606 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 F12P00748 615 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TMIGD3P0DMS9 266 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 IL9P15248 144 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TIMP2P16035 220 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 SOX2P48431 317 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 KCNJ3P48549 501 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 RAB13P51153 203 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 LUMP51884 338 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 UBXN2BQ14CS0 331 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 LTB4RQ15722 352 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 OR4C11Q6IEV9 310 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 FAM199XQ6PEV8 388 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ZC3H14Q6PJT7 736 aaKnown RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TSSK4Q6SA08 328 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 OR2AK2Q8NG84 335 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 NANPQ8TBE9 248 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 PPP1R16AQ96I34 528 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 LCORQ96JN0 433 aaPredicted RBP10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ZNF559Q9BR84 538 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 TMPRSS13Q9BYE2 586 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 KLHL31Q9H511 634 aa10.67□□□□□ -0.7
HMGCS1-202ENST00000433297 ADGRL4Q9HBW9 690 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms