RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 ULK3Q6PHR2 472 aa13.45□□□□□ -0.26
RFTN1-203ENST00000432519 OR4C6Q8NH72 309 aa13.45□□□□□ -0.26
RFTN1-203ENST00000432519 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
RFTN1-203ENST00000432519 CHRDQ9H2X0 955 aa13.45□□□□□ -0.26
RFTN1-203ENST00000432519 COMMD3Q9UBI1 195 aa13.45□□□□□ -0.26
RFTN1-203ENST00000432519 GMEB2Q9UKD1 530 aa13.45□□□□□ -0.26
RFTN1-203ENST00000432519 IGKV1D-42A0A075B6H8 117 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 DAPL1A0PJW8 107 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 DCNP07585 359 aaKnown RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 SBK2P0C263 348 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 PEPDP12955 493 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 TMEM44Q2T9K0 475 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 KLHL26Q53HC5 615 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 COL13A1Q5TAT6 717 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 C1orf189Q5VU69 101 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 NRARPQ7Z6K4 114 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 NEIL3Q8TAT5 605 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 DNAJA4Q8WW22 397 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 TP53INP1Q96A56 240 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 ZMYND19Q96E35 227 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 RNF32Q9H0A6 362 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 BABAM2Q9NXR7 383 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 MALT1Q9UDY8 824 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 FBXL21Q9UKT6 434 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 ZNF346Q9UL40 294 aaKnown RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 IER3IP1Q9Y5U9 82 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 SOX1O00570 391 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 TFP02787 698 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 GRM7Q14831 915 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 PTCRAQ6ISU1 281 aaPredicted RBP13.44□□□□□ -0.26
RFTN1-203ENST00000432519 RTL4Q6ZR62 310 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 FAM174AQ8TBP5 190 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 WDFY2Q96P53 400 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 G6PC3Q9BUM1 346 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 JAM3Q9BX67 310 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 CPNE5Q9HCH3 593 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 CHRNA9Q9UGM1 479 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 PI4KAP42356 2102 aa13.44□□□□□ -0.26
RFTN1-203ENST00000432519 A0A087WUJ7 227 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 A0A1B0GVT2 93 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 RIIAD1A6NNX1 92 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 H0YIG0 161 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 GTPBP1O00178 669 aaKnown RBP13.43□□□□□ -0.26
RFTN1-203ENST00000432519 RNF13O43567 381 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 RFX2P48378 723 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 CCR4P51679 360 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 SKP1P63208 163 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 ACSM1Q08AH1 577 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 TCTE1Q5JU00 501 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 FAAH2Q6GMR7 532 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 FAM131AQ6UXB0 335 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 SHISA6Q6ZSJ9 500 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 OR13C5Q8NGS8 318 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 RELTQ969Z4 430 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 ZDHHC12Q96GR4 267 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 AHCYL2Q96HN2 611 aaKnown RBP13.43□□□□□ -0.26
RFTN1-203ENST00000432519 DIRAS2Q96HU8 199 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 C4orf36Q96KX1 117 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 SIAEQ9HAT2 523 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 TRAPPC4Q9Y296 219 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 A0A1W2PQ09 198 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 PTTG1O95997 202 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 IL7P13232 177 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 GALEQ14376 348 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 FNDC7Q5VTL7 733 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 ARL9Q6T311 187 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 ZNF550Q7Z398 422 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 TMPRSS9Q7Z410 1059 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 OR5J2Q8NH18 312 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 SMPDL3BQ92485 455 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 GAL3ST4Q96RP7 486 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 ADOQ96SZ5 270 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 SMAD5Q99717 465 aaKnown RBP13.43□□□□□ -0.26
RFTN1-203ENST00000432519 MED18Q9BUE0 208 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 KLHL1Q9NR64 748 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 RPS6KB2Q9UBS0 482 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 EPHA6Q9UF33 1036 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 GSTK1Q9Y2Q3 226 aa13.43□□□□□ -0.26
RFTN1-203ENST00000432519 J3QLW9 94 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 HPGDSO60760 199 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 SERPINI2O75830 405 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 ZNF19P17023 458 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 ACVR1BP36896 505 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 RBM34P42696 430 aaKnown RBP13.42□□□□□ -0.26
RFTN1-203ENST00000432519 STARD6P59095 220 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 ZP2Q05996 745 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 P2RY14Q15391 338 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 RPL13AP3Q6NVV1 102 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 TSSK4Q6SA08 328 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 UBE2J2Q8N2K1 259 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 MOSPD2Q8NHP6 518 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 PHOSPHO1Q8TCT1 267 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 RASD2Q96D21 266 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 MOGAT1Q96PD6 335 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 ATF6BQ99941 703 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 NUDT22Q9BRQ3 303 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 SLC22A31A6NKX4 558 aa13.42□□□□□ -0.26
RFTN1-203ENST00000432519 DDAH2O95865 285 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms