RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 ZNF208O43345 1280 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SEMA7AO75326 666 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 ZNF682O95780 498 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 ATP6V1B2P21281 511 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SFTPDP35247 375 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 MAP2K6P52564 334 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 NCALDP61601 193 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SRSF1Q07955 248 aaKnown RBP eCLIP12.93□□□□□ -0.348e-8■■■□□ 15.4
CSTF3-202ENST00000431742 TRIM25Q14258 630 aaKnown RBP12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SF3B4Q15427 424 aaKnown RBP eCLIP12.93□□□□□ -0.341e-7■■■■□ 19.5
CSTF3-202ENST00000431742 OR1Q1Q15612 314 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 NSUN5P2Q63ZY6 315 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 POMZP3Q6PJE2 187 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 B3GNT6Q6ZMB0 384 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SEM1Q6ZVN7 128 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 FJX1Q86VR8 437 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 LSRQ86X29 649 aaPredicted RBP12.93□□□□□ -0.34
CSTF3-202ENST00000431742 OR2V1Q8NHB1 315 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 VANGL1Q8TAA9 524 aaPredicted RBP12.93□□□□□ -0.34
CSTF3-202ENST00000431742 TPD52L3Q96J77 140 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 HSH2DQ96JZ2 352 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 MCHR1Q99705 422 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 THTPAQ9BU02 230 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SERINC1Q9NRX5 453 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 ACTR3BQ9P1U1 418 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 ERRFI1Q9UJM3 462 aaPredicted RBP12.93□□□□□ -0.34
CSTF3-202ENST00000431742 RPS6KA6Q9UK32 745 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SAMD4AQ9UPU9 718 aaKnown RBP12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SLC5A6Q9Y289 635 aa12.93□□□□□ -0.34
CSTF3-202ENST00000431742 SPIN1Q9Y657 262 aaPredicted RBP12.93□□□□□ -0.34
CSTF3-202ENST00000431742 CACNA1CQ13936 2221 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 TMEM72A0PK05 275 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 CLCA1A8K7I4 914 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 EIF1AYO14602 144 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 TNFSF11O14788 317 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 GMNNO75496 209 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 DNAJC8O75937 253 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 LYPD3O95274 346 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 OPN1LWP04000 364 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 GLI4P10075 376 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 FKBP2P26885 142 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 OR1E2P47887 323 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 CLK1P49759 484 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 RASSF2P50749 326 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 RPS3AP61247 264 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 TMEM176BQ3YBM2 270 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 IFI44LQ53G44 452 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 SYT14P1Q58G82 188 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 ENTPD8Q5MY95 495 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 SWT1Q5T5J6 900 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 LCN8Q6JVE9 175 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 ULK3Q6PHR2 472 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 RPTNQ6XPR3 784 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 FAM86B1Q8N7N1 296 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 OR10D3Q8NH80 312 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 MBD3L2Q8NHZ7 208 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 DNAJA4Q8WW22 397 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 GEMIN6Q8WXD5 167 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 SLC38A4Q969I6 547 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 ASB9Q96DX5 294 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 CCDC120Q96HB5 630 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 ZNF845Q96IR2 970 aaPredicted RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 NSMCE2Q96MF7 247 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 TTYH2Q9BSA4 534 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 CADM1Q9BY67 442 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 OR11A1Q9GZK7 315 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 POLR2J2Q9GZM3 115 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 POLR2J3Q9H1A7 115 aaKnown RBP12.92□□□□□ -0.34
CSTF3-202ENST00000431742 LRMDAQ9H2I8 198 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 CALHM2Q9HA72 323 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 TMEM27Q9HBJ8 222 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 ALKBH4Q9NXW9 302 aa12.92□□□□□ -0.34
CSTF3-202ENST00000431742 ZC3H12DA2A288 527 aaKnown RBP12.91□□□□□ -0.34
CSTF3-202ENST00000431742 EBAG9O00559 213 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 GSC2O15499 205 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 NPIPB7O75200 414 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 THY1P04216 161 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 SEMG1P04279 462 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 CXCR1P25024 350 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 CDH12P55289 794 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 NUP107P57740 925 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 ADORA2A-AS1P86434 159 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 MS4A2Q01362 244 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 KCNC4Q03721 635 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 ALG10BQ5I7T1 473 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 HBMQ6B0K9 141 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 MTFR2Q6P444 385 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 NCCRP1Q6ZVX7 275 aaPredicted RBP12.91□□□□□ -0.34
CSTF3-202ENST00000431742 TSEN54Q7Z6J9 526 aaKnown RBP12.91□□□□□ -0.34
CSTF3-202ENST00000431742 ATP6V1C2Q8NEY4 427 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 ADAMTS16Q8TE57 1224 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 PAQR5Q9NXK6 330 aaPredicted RBP12.91□□□□□ -0.34
CSTF3-202ENST00000431742 RPS6KB2Q9UBS0 482 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 ZNF175Q9Y473 711 aa12.91□□□□□ -0.34
CSTF3-202ENST00000431742 SPTBN1Q01082 2364 aaKnown RBP12.91□□□□□ -0.34
CSTF3-202ENST00000431742 IGKV1D-42A0A075B6H8 117 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms