RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 FOXF1Q12946 379 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 MAD2L1Q13257 205 aaPredicted RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 CD226Q15762 336 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 ARHGAP11BQ3KRB8 267 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 RFTN2Q52LD8 501 aaPredicted RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 DCST2Q5T1A1 773 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 FAM166AQ6J272 317 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 CBLN3Q6UW01 205 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 EIF3MQ7L2H7 374 aaKnown RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 ABHD12BQ7Z5M8 362 aaPredicted RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 CMIPQ8IY22 773 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 LRRC34Q8IZ02 419 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 KBTBD8Q8NFY9 601 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 CDC26Q8NHZ8 85 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 ZFAND2BQ8WV99 257 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 APH1AQ96BI3 265 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 C16orf58Q96GQ5 468 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 SF3B5Q9BWJ5 86 aaKnown RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 BHLHE41Q9C0J9 482 aaPredicted RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 SAP130Q9H0E3 1048 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 CXorf36Q9H7Y0 433 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 EQTNQ9NQ60 294 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 EXOSC3Q9NQT5 275 aaKnown RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 SIRT3Q9NTG7 399 aaPredicted RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 EXD2Q9NVH0 621 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 GPATCH2Q9NW75 528 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 PYCARDQ9ULZ3 195 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 CARD8Q9Y2G2 431 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 NOSIPQ9Y314 301 aaKnown RBP7.29□□□□□ -1.24
CDH13-203ENST00000431540 DNAJC15Q9Y5T4 150 aa7.29□□□□□ -1.24
CDH13-203ENST00000431540 IGHV4-30-2A0A087WSY4 118 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 CIB4A0PJX0 185 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 ZNF716A6NP11 495 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 SCAMP2O15127 329 aaKnown RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 NPHS1O60500 1241 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 RAMP1O60894 148 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 PCMT1P22061 227 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 FABP6P51161 128 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 IRX1P78414 480 aaPredicted RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 POU3F1Q03052 451 aaPredicted RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 FAPQ12884 760 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 LASP1Q14847 261 aaKnown RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 QPRTQ15274 297 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 GABRA6Q16445 453 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 ZSWIM7Q19AV6 140 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 SWI5Q1ZZU3 235 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 UGT3A2Q3SY77 523 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 TIGD2Q4W5G0 525 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 SYT14P1Q58G82 188 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 KANK2Q63ZY3 851 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 ABLIM2Q6H8Q1 611 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 SLC22A25Q6T423 547 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 ZAR1Q86SH2 424 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 KIRREL3Q8IZU9 778 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 RFLNBQ8N5W9 214 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 POMGNT2Q8NAT1 580 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 FAM71CQ8NEG0 241 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 CDS1Q92903 461 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 CIDECQ96AQ7 238 aaPredicted RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 SH3YL1Q96HL8 342 aaPredicted RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 NPAS1Q99742 590 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 NAA11Q9BSU3 229 aaPredicted RBP7.28□□□□□ -1.24
CDH13-203ENST00000431540 CACNG6Q9BXT2 260 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 TXLNGYQ9BZA5 131 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 POU2F3Q9UKI9 436 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 EMCNQ9ULC0 261 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 KCNS2Q9ULS6 477 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 PCDHGB4Q9UN71 923 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 SLC9A8Q9Y2E8 581 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 FKBP7Q9Y680 259 aa7.28□□□□□ -1.24
CDH13-203ENST00000431540 B9A039 149 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 GPRIN2O60269 458 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 LYZL6O75951 148 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 VAMP5O95183 116 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 OPN1LWP04000 364 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 SRD5A1P18405 259 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 GIFP27352 417 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 SHC1P29353 583 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 KHKP50053 298 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 PDLIM4P50479 330 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 SESN3P58005 492 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 PRPS1P60891 318 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 PHC1P78364 1004 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 SLC35A1P78382 337 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 LRRC74AQ0VAA2 488 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 SCGB2A2Q13296 93 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 SKP2Q13309 424 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 GSTA3Q16772 222 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 ZNF385BQ569K4 471 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 GRINAQ7Z429 371 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 RIMKLAQ8IXN7 391 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 CCDC36Q8IYA8 594 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 GATSQ8NAP1 163 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 MAPK1IP1LQ8NDC0 245 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 VPS37AQ8NEZ2 397 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 IL17RDQ8NFM7 739 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 OR8J2Q8NGG1 315 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 MAGEE2Q8TD90 523 aaPredicted RBP7.27□□□□□ -1.25
CDH13-203ENST00000431540 JADE3Q92613 823 aa7.27□□□□□ -1.25
CDH13-203ENST00000431540 NEUROG1Q92886 237 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms