RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ALDH6A1Q02252 535 aaKnown RBP16.57■□□□□ 0.24
HMGN1-206ENST00000431390 IL18R1Q13478 541 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 ELOA3BQ3SY89 546 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 PRAMEF20Q5VT98 475 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 OR5M10Q6IEU7 315 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 CDK20Q8IZL9 346 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 FADS6Q8N9I5 356 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 ELOA3Q8NG57 546 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 ZNF524Q96C55 264 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 FAM46AQ96IP4 442 aaKnown RBP16.57■□□□□ 0.24
HMGN1-206ENST00000431390 CNBD2Q96M20 576 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 TMEM43Q9BTV4 400 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 ING2Q9H160 280 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 PROK2Q9HC23 129 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 MED11Q9P086 117 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 REV1Q9UBZ9 1251 aa16.57■□□□□ 0.24
HMGN1-206ENST00000431390 B4DXG7 233 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 KLF4O43474 513 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 GMFGO60234 142 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 PIP5K1CO60331 668 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 IGF2P01344 180 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 P04436 131 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 TACR3P29371 465 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 POLR2IP36954 125 aaKnown RBP16.56■□□□□ 0.24
HMGN1-206ENST00000431390 HTR3AP46098 478 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 KEAP1Q14145 624 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 TOMM34Q15785 309 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-206ENST00000431390 GRINAQ7Z429 371 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 OR2M3Q8NG83 312 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 TMEM41AQ96HV5 264 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 PITX2Q99697 317 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 GPA33Q99795 319 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 UTP23Q9BRU9 249 aaKnown RBP16.56■□□□□ 0.24
HMGN1-206ENST00000431390 MEPEQ9NQ76 525 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-206ENST00000431390 SACM1LQ9NTJ5 587 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 PIEZO2Q9H5I5 2752 aa16.56■□□□□ 0.24
HMGN1-206ENST00000431390 ETV2O00321 342 aaPredicted RBP16.55■□□□□ 0.24
HMGN1-206ENST00000431390 BCKDKO14874 412 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 GNAO1P09471 354 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 IFI30P13284 250 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 POLR2HP52434 150 aaKnown RBP16.55■□□□□ 0.24
HMGN1-206ENST00000431390 OC90Q02509 493 aaPredicted RBP16.55■□□□□ 0.24
HMGN1-206ENST00000431390 NFATC3Q12968 1075 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 PDK3Q15120 406 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 AGAP7PQ5VUJ5 663 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 ISLR2Q6UXK2 745 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 TMPRSS11FQ6ZWK6 438 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 MDGA2Q7Z553 956 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 ZNF227Q86WZ6 799 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 PLCZ1Q86YW0 608 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 WDSUB1Q8N9V3 476 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 PSD4Q8NDX1 1056 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 PFN4Q8NHR9 129 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 BPIFA2Q96DR5 249 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 AGAP4Q96P64 663 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 DSN1Q9H410 356 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 PTGES2Q9H7Z7 377 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 TIMMDC1Q9NPL8 285 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 LRFN1Q9P244 771 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 OSGIN1Q9UJX0 560 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 NDRG4Q9ULP0 352 aaKnown RBP16.55■□□□□ 0.24
HMGN1-206ENST00000431390 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 SNPHO15079 494 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 PRKCAP17252 672 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 CD96P40200 585 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 CRISP1P54107 249 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 TUBA3CQ13748 450 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 TUBA3EQ6PEY2 450 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 RASSF6Q6ZTQ3 369 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 EXD3Q8N9H8 876 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 OR4K17Q8NGC6 315 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 HRASLS5Q96KN8 279 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 NR1H4Q96RI1 486 aaPredicted RBP16.55■□□□□ 0.24
HMGN1-206ENST00000431390 RNF32Q9H0A6 362 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 C20orf141Q9NUB4 165 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 ANKRD10Q9NXR5 420 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 GPR83Q9NYM4 423 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 HRH3Q9Y5N1 445 aa16.55■□□□□ 0.24
HMGN1-206ENST00000431390 NAV2Q8IVL1 2488 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 KPNA4O00629 521 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-206ENST00000431390 EFSO43281 561 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 CLIC3O95833 236 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 TP53P04637 393 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-206ENST00000431390 CHMP24386 653 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 CXCR1P25024 350 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 EPHA2P29317 976 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 GPR4P46093 362 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 ZNF41P51814 821 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-206ENST00000431390 SLC25A53Q5H9E4 307 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 ZNF691Q5VV52 312 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 KRT80Q6KB66 452 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 C8orf59Q8N0T1 100 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-206ENST00000431390 CLDN22Q8N7P3 220 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 SETD9Q8NE22 299 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 MUS81Q96NY9 551 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 MED17Q9NVC6 651 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 GMPPBQ9Y5P6 360 aa16.54■□□□□ 0.24
HMGN1-206ENST00000431390 IGKV1D-42A0A075B6H8 117 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 ZAR1LA6NP61 321 aa16.53■□□□□ 0.24
HMGN1-206ENST00000431390 FAM47E-STBD1D6RA91 191 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms