RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ITGA3P26006 1051 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 TNFRSF17Q02223 184 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 IRF3Q14653 427 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 FAM69AQ5T7M9 428 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 RDH10Q8IZV5 341 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 MFSD9Q8NBP5 474 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 OR2T4Q8NH00 348 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 TRMT61AQ96FX7 289 aaKnown RBP11.73□□□□□ -0.53
CPNE4-201ENST00000429747 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
CPNE4-201ENST00000429747 TIMM29Q9BSF4 260 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 SEC61A2Q9H9S3 476 aa11.73□□□□□ -0.53
CPNE4-201ENST00000429747 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
CPNE4-201ENST00000429747 A0A0A6YYC8 382 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 I3L1I5 382 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SURF4O15260 269 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 CDC40O60508 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 GALEQ14376 348 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 FAM78AQ5JUQ0 283 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 RFPL4BQ6ZWI9 263 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 DGLUCYQ7Z3D6 616 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 RNF113BQ8IZP6 322 aaKnown RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 OR7G2Q8NG99 324 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 REV1Q9UBZ9 1251 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 MKL2Q9ULH7 1088 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 DHDHQ9UQ10 334 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 TMEM14AQ9Y6G1 99 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 AMY2AP04746 511 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 GP1BBP13224 206 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 PRSS3P35030 304 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 OR3A2P47893 321 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 RFX2P48378 723 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 BTG1P62324 171 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 GPLD1P80108 840 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 DBPQ10586 325 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ZNF79Q15937 498 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ALG10Q5BKT4 473 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 TCTE1Q5JU00 501 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 TRIM43Q96BQ3 446 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 MED30Q96HR3 178 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 MED18Q9BUE0 208 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SLC38A1Q9H2H9 487 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ANKRD19PQ9H560 264 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 CDCP1Q9H5V8 836 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 POT1Q9NUX5 634 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ANK1P16157 1881 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SCO1O75880 301 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ZNF432O94892 652 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 AHSA1O95433 338 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 S1PR1P21453 382 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 BTN1A1Q13410 526 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SQSTM1Q13501 440 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 OPCMLQ14982 345 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SWI5Q1ZZU3 235 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ULK3Q6PHR2 472 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 C12orf40Q86WS4 652 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 OR4Q3Q8NH05 313 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 DDOQ99489 341 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 FAM83CQ9BQN1 747 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 HPF1Q9NWY4 346 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 SLC39A1Q9NY26 324 aa11.72□□□□□ -0.53
CPNE4-201ENST00000429747 TESQ9UGI8 421 aaKnown RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.72□□□□□ -0.53
CPNE4-201ENST00000429747 TMEM72A0PK05 275 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 NAP1L6A6NFF2 107 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 RHPN2P1A8MT19 583 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 SCO2O43819 266 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 NTN1O95631 604 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 TIMP1P01033 207 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 F13BP05160 661 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 PROS1P07225 676 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 LIPCP11150 499 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 MAKP20794 623 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 CD79BP40259 229 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 C21orf58P58505 322 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 ERV3-1Q14264 604 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 SMCO1Q147U7 214 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 MAPK14Q16539 360 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 NKPD1Q17RQ9 610 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 NIPAL3Q6P499 406 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 RPL22L1Q6P5R6 122 aaKnown RBP11.71□□□□□ -0.53
CPNE4-201ENST00000429747 BADQ92934 168 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 DPYSL5Q9BPU6 564 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 MIXL1Q9H2W2 232 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 IL23AQ9NPF7 189 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 ISYNA1Q9NPH2 558 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 GPR55Q9Y2T6 319 aaPredicted RBP11.71□□□□□ -0.53
CPNE4-201ENST00000429747 DCDC2BA2VCK2 349 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 H0YGG7 62 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 S100A6P06703 90 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 NTSR1P30989 418 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
CPNE4-201ENST00000429747 ARF3P61204 181 aaPredicted RBP11.71□□□□□ -0.53
CPNE4-201ENST00000429747 AGERQ15109 404 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 HACD4Q5VWC8 232 aa11.71□□□□□ -0.53
CPNE4-201ENST00000429747 KCTD18Q6PI47 426 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms