RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	ZNF704	Q6ZNC4	412 aa	Predicted RBP	15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	LRRC74B	Q6ZQY2	392 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	GRINA	Q7Z429	371 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	WFDC8	Q8IUA0	241 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	CMIP	Q8IY22	773 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	ANKFN1	Q8N957	763 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	PLPPR2	Q96GM1	343 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	MANSC1	Q9H8J5	431 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	CTPS2	Q9NRF8	586 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	CHRNA9	Q9UGM1	479 aa		15.72	■□□□□ 0.11
MRPL28-203	ENST00000429738	ABCA1	O95477	2261 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	AGAP5	A6NIR3	686 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	KLF11	O14901	512 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	PLAU	P00749	431 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ADA	P00813	363 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	IL6	P05231	212 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	EDNRA	P25101	427 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	MVD	P53602	400 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	CSNK2A1	P68400	391 aa	Predicted RBP	15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ITGAD	Q13349	1161 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	TSC22D1	Q15714	1073 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	MAPK11	Q15759	364 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	COX20	Q5RI15	118 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	SEZ6L2	Q6UXD5	910 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ZNF621	Q6ZSS3	439 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738		Q6ZT83	130 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	HMGN2P46	Q86SG4	172 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ADGRG3	Q86Y34	549 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ARFGAP2	Q8N6H7	521 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ZNF563	Q8TA94	476 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ZNF300	Q96RE9	604 aa	Predicted RBP	15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	ZBTB18	Q99592	522 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	SDR39U1	Q9NRG7	319 aa	Predicted RBP	15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	SLC6A13	Q9NSD5	602 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	NKIRAS1	Q9NYS0	192 aa		15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	SPIN1	Q9Y657	262 aa	Predicted RBP	15.71	■□□□□ 0.11
MRPL28-203	ENST00000429738	CAD	P27708	2225 aa		15.71	■□□□□ 0.1
MRPL28-203	ENST00000429738	IGKV3D-15	A0A087WSY6	115 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	SULT2B1	O00204	365 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	SLC22A3	O75751	556 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	PMS2P2	O95744	297 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	GSN	P06396	782 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	FES	P07332	822 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	FKBP2	P26885	142 aa	Known RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	RYK	P34925	604 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	MAGEA8	P43361	318 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	ANXA11	P50995	505 aa	Known RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	PDK3	Q15120	406 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	TAB1	Q15750	504 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	GSTA3	Q16772	222 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	MTDH	Q86UE4	582 aa	Known RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	PIWIL2	Q8TC59	973 aa	Known RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	CNOT9	Q92600	299 aa	Known RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	PMM1	Q92871	262 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	ARL5B	Q96KC2	179 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	USB1	Q9BQ65	265 aa	Known RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZNF701	Q9NV72	531 aa	Predicted RBP	15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZIM2	Q9NZV7	527 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	PRSS50	Q9UI38	385 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	HDGFL3	Q9Y3E1	203 aa		15.7	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZNF716	A6NP11	495 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	FAAH	O00519	579 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	RFXANK	O14593	260 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	DNPH1	O43598	174 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	ERLIN1	O75477	346 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	KRT75	O95678	551 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZCCHC18	P0CG32	403 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	IL32	P24001	234 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	CLK1	P49759	484 aa	Known RBP	15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	NXN	Q6DKJ4	435 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	ADAM5	Q6NVV9	412 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZNF611	Q8N823	705 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	PNPT1	Q8TCS8	783 aa	Known RBP	15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	TMEM171	Q8WVE6	324 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	HSD17B8	Q92506	261 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	KISS1R	Q969F8	398 aa	Predicted RBP	15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	POTEKP	Q9BYX7	375 aa		15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	MTHFD2L	Q9H903	347 aa	Predicted RBP	15.69	■□□□□ 0.1
MRPL28-203	ENST00000429738	DSPP	Q9NZW4	1301 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	AP3D1	O14617	1153 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	HS3ST1	O14792	307 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	TMCC2	O75069	709 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	COX5A	P20674	150 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	HTR3A	P46098	478 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	IDH2	P48735	452 aa	Known RBP	15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	CAPRIN1	Q14444	709 aa	Known RBP	15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	NCMAP	Q5T1S8	102 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	MSANTD1	Q6ZTZ1	278 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	GALNT5	Q7Z7M9	940 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	LILRB1	Q8NHL6	650 aa	Predicted RBP	15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	WDR60	Q8WVS4	1066 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZNF775	Q96BV0	537 aa	Predicted RBP	15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	OR52B2	Q96RD2	323 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	CXorf56	Q9H5V9	222 aa		15.68	■□□□□ 0.1
MRPL28-203	ENST00000429738	ZNF208	O43345	1280 aa		15.67	■□□□□ 0.1
MRPL28-203	ENST00000429738	DBI	P07108	87 aa	Known RBP	15.67	■□□□□ 0.1
MRPL28-203	ENST00000429738	NR2F1	P10589	423 aa		15.67	■□□□□ 0.1
MRPL28-203	ENST00000429738	TFPI	P10646	304 aa		15.67	■□□□□ 0.1
MRPL28-203	ENST00000429738	IL7R	P16871	459 aa		15.67	■□□□□ 0.1
MRPL28-203	ENST00000429738	IGHV1-2	P23083	117 aa		15.67	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms