RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 RNF220Q5VTB9 566 aa16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 ABLIM2Q6H8Q1 611 aa16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 SLC25A43Q8WUT9 341 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 ZNF300Q96RE9 604 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 CPPED1Q9BRF8 314 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 ADAM19Q9H013 955 aa16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 BCL2L10Q9HD36 194 aa16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 SERINC1Q9NRX5 453 aa16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 CALML5Q9NZT1 146 aa16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 C6orf203Q9P0P8 240 aaPredicted RBP16.09■□□□□ 0.17
SSR4P1-202ENST00000429427 TMED7-TICAM2A0A0A6YYA0 188 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 A0A0G2JPF8 293 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 HNRNPCL2B2RXH8 293 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 HNRNPCL3B7ZW38 293 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 HNRNPCL1O60812 293 aaKnown RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 RAMP1O60894 148 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 GCM2O75603 506 aaPredicted RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 PRKD3O94806 890 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 YES1P07947 543 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 THBS1P07996 1170 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 PABPC4LP0CB38 370 aaKnown RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 HNRNPCL4P0DMR1 293 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 ARAFP10398 606 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 TACR3P29371 465 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 SLC1A3P43003 542 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 IST1P53990 364 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 IRX1P78414 480 aaPredicted RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 GABRG1Q8N1C3 465 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 ZNF775Q96BV0 537 aaPredicted RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 REXO5Q96IC2 774 aaKnown RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 KLHL4Q9C0H6 718 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 GP6Q9HCN6 339 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 THUMPD1Q9NXG2 353 aaKnown RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 NDRG3Q9UGV2 375 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 ST6GALNAC2Q9UJ37 374 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 TMED7Q9Y3B3 224 aa16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 ZNF469Q96JG9 3925 aaPredicted RBP16.08■□□□□ 0.16
SSR4P1-202ENST00000429427 VPS13CQ709C8 3753 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 ZNF716A6NP11 495 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 SULT2B1O00204 365 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 FRS3O43559 492 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 PGM3O95394 542 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 TFPIP10646 304 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 IMPDH2P12268 514 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 GPX2P18283 190 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 NTF4P34130 210 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 POLR2HP52434 150 aaKnown RBP16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 SELPLGQ14242 412 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 GNA13Q14344 377 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 PRAMEF8Q5VWM4 474 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 PRAMEF7Q5VXH5 474 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 GTF2IRD2BQ6EKJ0 949 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 SERPINA11Q86U17 422 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 GTF2IRD2Q86UP8 949 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 SLC43A2Q8N370 569 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 NFKBIDQ8NI38 313 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 HS3ST6Q96QI5 342 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 MED18Q9BUE0 208 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 SPATA9Q9BWV2 254 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 TMEM120AQ9BXJ8 343 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 FGFR1OP2Q9NVK5 253 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 PLEKHA6Q9Y2H5 1048 aa16.07■□□□□ 0.16
SSR4P1-202ENST00000429427 MTORP42345 2549 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 GOSR1O95249 250 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 PMS2P2O95744 297 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 CRYGSP22914 178 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 H3F3AP84243 136 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 HOXC5Q00444 222 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 GUCY1A3Q02108 690 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 RASGEF1BQ0VAM2 473 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 SF3A3Q12874 501 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 TSC22D1Q15714 1073 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 RUNDC3AQ59EK9 446 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 TMEM201Q5SNT2 666 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 GCNT6Q5T4J0 391 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 PAMR1Q6UXH9 720 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 MTDHQ86UE4 582 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 CXorf67Q86X51 503 aaPredicted RBP16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 DPP10Q8N608 796 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 BBS10Q8TAM1 723 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 ZC3HAV1LQ96H79 300 aaKnown RBP16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 SIKE1Q9BRV8 207 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 RAD21L1Q9H4I0 556 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 CCM2LQ9NUG4 571 aaPredicted RBP16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 KLHL9Q9P2J3 617 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 HDGFL3Q9Y3E1 203 aa16.06■□□□□ 0.16
SSR4P1-202ENST00000429427 ROS1P08922 2347 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 IGKV3D-15A0A087WSY6 115 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 ZNF208O43345 1280 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 PSMB1P20618 241 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 HTR3AP46098 478 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 CSNK2A1P68400 391 aaPredicted RBP16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 LARS2Q15031 903 aaKnown RBP16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 GLIPR1L2Q4G1C9 344 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 ZNF311Q5JNZ3 666 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 BEND4Q6ZU67 534 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 PTOV1Q86YD1 416 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 CCDC103Q8IW40 242 aa16.05■□□□□ 0.16
SSR4P1-202ENST00000429427 ZNF440Q8IYI8 595 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms