RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SELENOWP63302 87 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 SRSF1Q07955 248 aaKnown RBP eCLIP13.09□□□□□ -0.31
SGCE-204ENST00000428696 PON3Q15166 354 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 OR1Q1Q15612 314 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 ELOA3BQ3SY89 546 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 DEF8Q6ZN54 512 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 MARVELD2Q8N4S9 558 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 ELOA3Q8NG57 546 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 FNDC9Q8TBE3 224 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 SSC4DQ8WTU2 575 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 DDIT4LQ96D03 193 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 CALHM2Q9HA72 323 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 TAS2R1Q9NYW7 299 aa13.09□□□□□ -0.31
SGCE-204ENST00000428696 MYO7BQ6PIF6 2116 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 A0A1B0GWA3 101 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 TMEM72A0PK05 275 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 SULT2B1O00204 365 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 SYT5O00445 386 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 FAAHO00519 579 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 NTN1O95631 604 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 TGM6O95932 706 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 PLGP00747 810 aaPredicted RBP13.08□□□□□ -0.32
SGCE-204ENST00000428696 GGT1P19440 569 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 HTR2AP28223 471 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 ZNF136P52737 540 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 CEACAM7Q14002 265 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 SYT14P1Q58G82 188 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 ALG10BQ5I7T1 473 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 NSUN5P2Q63ZY6 315 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 VTCN1Q7Z7D3 282 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 P3H2Q8IVL5 708 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 MCEMP1Q8IX19 187 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 GCNT2Q8N0V5 402 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 C9orf106Q8NAJ2 232 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 OR4D11Q8NGI4 311 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 CA5BP1Q8WTZ4 195 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 ROBO4Q8WZ75 1007 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 INTS12Q96CB8 462 aaKnown RBP13.08□□□□□ -0.32
SGCE-204ENST00000428696 DMRTA2Q96SC8 542 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 ARHGDIGQ99819 225 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 ADAM19Q9H013 955 aa13.08□□□□□ -0.32
SGCE-204ENST00000428696 TESQ9UGI8 421 aaKnown RBP13.08□□□□□ -0.32
SGCE-204ENST00000428696 MCTS1Q9ULC4 181 aaKnown RBP13.08□□□□□ -0.32
SGCE-204ENST00000428696 IGHV3-15A0A0B4J1V0 119 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 A1L4Q6 167 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CD8B2A6NJW9 211 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 ADAMDEC1O15204 470 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 TPST2O60704 377 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 YAP1P46937 504 aaKnown RBP13.07□□□□□ -0.32
SGCE-204ENST00000428696 TAS2R41P59536 307 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 ADORA2A-AS1P86434 159 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 NRF1Q16656 503 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 ULK3Q6PHR2 472 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CYP2R1Q6VVX0 501 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 C10orf53Q8N6V4 93 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CNEP1R1Q8N9A8 125 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
SGCE-204ENST00000428696 WNT2BQ93097 391 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 SLC35B4Q969S0 331 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 C3orf49Q96BT1 292 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CCDC124Q96CT7 223 aaKnown RBP13.07□□□□□ -0.32
SGCE-204ENST00000428696 SLC47A1Q96FL8 570 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CLPTM1LQ96KA5 538 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 TM9SF2Q99805 663 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 EVA1AQ9H8M9 152 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 RPS6KA6Q9UK32 745 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 CLEC4AQ9UMR7 237 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 RNF6Q9Y252 685 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 SNX13Q9Y5W8 968 aa13.07□□□□□ -0.32
SGCE-204ENST00000428696 A0A0G2JNJ9 132 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 ZC3H12DA2A288 527 aaKnown RBP13.06□□□□□ -0.32
SGCE-204ENST00000428696 FAM90A27PA6NNH2 459 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 STAMBPO95630 424 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 LDLRP01130 860 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 RNF224P0DH78 156 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 TMIGD3P0DMS9 266 aaPredicted RBP13.06□□□□□ -0.32
SGCE-204ENST00000428696 HSD17B1P14061 328 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 DIO1P49895 249 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 CDH12P55289 794 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 MYBPHQ13203 477 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 NPTX1Q15818 432 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 CTU2Q2VPK5 515 aaKnown RBP13.06□□□□□ -0.32
SGCE-204ENST00000428696 SEM1Q6ZVN7 128 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 PHF10Q8WUB8 498 aaKnown RBP13.06□□□□□ -0.32
SGCE-204ENST00000428696 DNAJA4Q8WW22 397 aaPredicted RBP13.06□□□□□ -0.32
SGCE-204ENST00000428696 SLC25A36Q96CQ1 311 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 ARL5BQ96KC2 179 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 NSMCE2Q96MF7 247 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 BTBD10Q9BSF8 475 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 SRXN1Q9BYN0 137 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 PAQR5Q9NXK6 330 aaPredicted RBP13.06□□□□□ -0.32
SGCE-204ENST00000428696 Q9UFV3 132 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 MAGEL2Q9UJ55 1249 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 HEATR5AQ86XA9 2040 aa13.06□□□□□ -0.32
SGCE-204ENST00000428696 HSPB2A8KAH6 182 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 A8MVM7 634 aa13.05□□□□□ -0.32
SGCE-204ENST00000428696 ETV2O00321 342 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms