RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 NOSIPQ9Y314 301 aaKnown RBP13.71□□□□□ -0.21
CTDSP1-202ENST00000428361 CENPVL1A0A0U1RR11 272 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 A0A1W2PP18 115 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF814B7Z6K7 855 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 HMGN4O00479 90 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 FAAHO00519 579 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 RFXANKO14593 260 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF208O43345 1280 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 PLAUP00749 431 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 DBIP07108 87 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 NR2F1P10589 423 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 IL7RP16871 459 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 COX5AP20674 150 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 POLR2HP52434 150 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC18A1P54219 525 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 CASP9P55211 416 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 PHC1P78364 1004 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 PPP2R2BQ00005 443 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 MAPK14Q16539 360 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF672Q499Z4 452 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 FBXW9Q5XUX1 488 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 DNAJC14Q6Y2X3 702 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF621Q6ZSS3 439 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 UBE2J2Q8N2K1 259 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ANKRD42Q8N9B4 389 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 WDR60Q8WVS4 1066 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 NAA11Q9BSU3 229 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ARMC7Q9H6L4 198 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 RMND5AQ9H871 391 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 CTPS2Q9NRF8 586 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 PNPOQ9NVS9 261 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 PARPBPQ9NWS1 579 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 TMEM181Q9P2C4 612 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 P2RX2Q9UBL9 471 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 ING1Q9UK53 422 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 MGAT4BQ9UQ53 548 aa13.7□□□□□ -0.22
CTDSP1-202ENST00000428361 CIB4A0PJX0 185 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 SDHDO14521 159 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 MRPL33O75394 65 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 ERLIN1O75477 346 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 LYZL6O75951 148 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 ANP32DO95626 131 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 IDUAP35475 653 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 IDH2P48735 452 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC16A1P53985 500 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 UFM1P61960 85 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC35A1P78382 337 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 CHRNEQ04844 493 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 FUT5Q11128 374 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 GSTA3Q16772 222 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 PDCD4Q53EL6 469 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 OR7E24Q6IFN5 339 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 KLHL17Q6TDP4 642 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 MSANTD1Q6ZTZ1 278 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 SMAP2Q8WU79 429 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF300Q96RE9 604 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 SMR3AQ99954 134 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 BARX1Q9HBU1 254 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 ASB6Q9NWX5 421 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 TAS2R16Q9NYV7 291 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 PRSS50Q9UI38 385 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC9A8Q9Y2E8 581 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 FREM1Q5H8C1 2179 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 HIVEP2P31629 2446 aa13.69□□□□□ -0.22
CTDSP1-202ENST00000428361 TMEM120BA0PK00 339 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 CFAP73A6NFT4 308 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 OR5H1A6NKK0 313 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 SMAD7O15105 426 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 PGM3O95394 542 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 LY6G6DO95868 133 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 ALDOCP09972 364 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC1A3P43003 542 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 NME5P56597 212 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 OR2B6P58173 313 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 TGFBR3Q03167 851 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 BSPH1Q075Z2 132 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 TSC22D1Q15714 1073 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 LIN52Q52LA3 116 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 NXNQ6DKJ4 435 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 TMEM108Q6UXF1 575 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 DEPDC4Q8N2C3 294 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 ZNF75CPQ92670 426 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 GRIP2Q9C0E4 1043 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC38A1Q9H2H9 487 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 ZIM2Q9NZV7 527 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 GPR45Q9Y5Y3 372 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 USF3Q68DE3 2245 aa13.68□□□□□ -0.22
CTDSP1-202ENST00000428361 NSD1Q96L73 2696 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 TMED7-TICAM2A0A0A6YYA0 188 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 FAM234BA2RU67 622 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 TRIM64A6NGJ6 449 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 TRIM64BA6NI03 449 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 CCT8L1PA6NM43 557 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 SNNO75324 88 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 SLC22A3O75751 556 aa13.67□□□□□ -0.22
CTDSP1-202ENST00000428361 IGHV1-2P23083 117 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms