RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CCDC86Q9H6F5 360 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 SPG21Q9NZD8 308 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 KLK11Q9UBX7 282 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 YBX2Q9Y2T7 364 aaKnown RBP4.76□□□□□ -1.65
RIF1-203ENST00000428287 IRAK3Q9Y616 596 aa4.76□□□□□ -1.65
RIF1-203ENST00000428287 A0A0B4J203 849 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 E9PI62 339 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ST8SIA5O15466 376 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SIX6O95475 246 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 NOS3P29474 1203 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 RPL35P42766 123 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 SRP9P49458 86 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 ZXDBP98169 803 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TRAM2Q15035 370 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 IRF4Q15306 451 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 UAP1L1Q3KQV9 507 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 LINC00303Q3SY05 128 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 H3F3CQ6NXT2 135 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 FIP1L1Q6UN15 594 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 TMUB2Q71RG4 321 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 OR5M1Q8NGP8 315 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 OR52I2Q8NH67 350 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 THAP6Q8TBB0 222 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 RBM18Q96H35 190 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 HIPK2Q9H2X6 1198 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 RERGLQ9H628 205 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 EPHX3Q9H6B9 360 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TMEM161AQ9NX61 479 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 A0A0G2JPF8 293 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 ACOD1A6NK06 481 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 HNRNPCL3B7ZW38 293 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 FAM157AC9JC47 383 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 BCAT2O15382 392 aaPredicted RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 DOK2O60496 412 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CDC123O75794 336 aaPredicted RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 HTR3BO95264 441 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 MT-ND5P03915 603 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 GLAP06280 429 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 HNRNPCL4P0DMR1 293 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 PAICSP22234 425 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 VIPR1P32241 457 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 RIDAP52758 137 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 HCCSP53701 268 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TAF10Q12962 218 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 DDX39BQ13838 428 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 HABP2Q14520 560 aaPredicted RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 FAM151BQ6UXP7 276 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 APOOLQ6UXV4 268 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 GAREM2Q75VX8 874 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SLC43A2Q8N370 569 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 NLGN2Q8NFZ4 835 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 PHOSPHO1Q8TCT1 267 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 XAGE5Q8WWM1 108 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 GHSRQ92847 366 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 GSDMCQ9BYG8 508 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CHRDQ9H2X0 955 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 KLHL9Q9P2J3 617 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 C17orf113A0A1B0GUU1 675 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CD8B2A6NJW9 211 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SLC22A31A6NKX4 558 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 PYCARD-AS1I3L0S3 204 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 BHLHE40O14503 412 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 POP7O75817 140 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 C6orf47O95873 294 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CD8BP10966 210 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TBXA2RP21731 343 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TAS2R50P59544 299 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 MC2RQ01718 297 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CDK5R1Q15078 307 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 C2orf68Q2NKX9 166 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ALG11Q2TAA5 492 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SLC25A35Q3KQZ1 300 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ZNF658BQ4V348 819 aaPredicted RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 FAM74A1Q5RGS3 127 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ACOT7LQ6ZUV0 252 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TMPRSS11FQ6ZWK6 438 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 FAM129CQ86XR2 697 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SULF1Q8IWU6 871 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SLC22A8Q8TCC7 542 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SPRYD4Q8WW59 207 aaPredicted RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 NEIL2Q969S2 332 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ZDHHC12Q96GR4 267 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 PAWRQ96IZ0 340 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 ZFP3Q96NJ6 502 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 DERL3Q96Q80 235 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 TMEM138Q9NPI0 162 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ST6GALNAC2Q9UJ37 374 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 RCE1Q9Y256 329 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ETV7Q9Y603 341 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 PRSS21Q9Y6M0 314 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 SLC5A10A0PJK1 596 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 POM121CA8CG34 1229 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CEACAM18A8MTB9 384 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 XRCC3O43542 346 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 UBBP0CG47 229 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 UBCP0CG48 685 aaKnown RBP4.75□□□□□ -1.65
RIF1-203ENST00000428287 STARP49675 285 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 CAP1Q01518 475 aa4.75□□□□□ -1.65
RIF1-203ENST00000428287 ECH1Q13011 328 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms