RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 WDR60Q8WVS4 1066 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 ZC3HAV1LQ96H79 300 aaKnown RBP11.33□□□□□ -0.6
SGCE-203ENST00000425444 WFIKKN1Q96NZ8 548 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 OR5B2Q96R09 309 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 SLC38A1Q9H2H9 487 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 CACYBPQ9HB71 228 aaKnown RBP11.33□□□□□ -0.6
SGCE-203ENST00000425444 EXOSC3Q9NQT5 275 aaKnown RBP11.33□□□□□ -0.6
SGCE-203ENST00000425444 PLSCR4Q9NRQ2 329 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 ACER3Q9NUN7 267 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 C6orf203Q9P0P8 240 aaPredicted RBP11.33□□□□□ -0.6
SGCE-203ENST00000425444 TENM1Q9UKZ4 2725 aa11.33□□□□□ -0.6
SGCE-203ENST00000425444 FAM234BA2RU67 622 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 TMEM247A6NEH6 219 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 CLDN24A6NM45 220 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 ETV2O00321 342 aaPredicted RBP11.32□□□□□ -0.6
SGCE-203ENST00000425444 BCAS1O75363 584 aaPredicted RBP11.32□□□□□ -0.6
SGCE-203ENST00000425444 PRKD3O94806 890 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 TGDSO95455 350 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 BCHEP06276 602 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 TFPIP10646 304 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 ETFAP13804 333 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 ENPP1P22413 925 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 APOBEC1P41238 236 aaKnown RBP11.32□□□□□ -0.6
SGCE-203ENST00000425444 MAGEA8P43361 318 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 AQP5P55064 265 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 GTDC1Q4AE62 458 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 SYT14P1Q58G82 188 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 ANKRD34AQ69YU3 496 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 BEND4Q6ZU67 534 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 GRINAQ7Z429 371 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 HIPK1Q86Z02 1210 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 CMIPQ8IY22 773 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 PEX5LQ8IYB4 626 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 SLC43A2Q8N370 569 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 ZNF524Q96C55 264 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 ZG16BQ96DA0 208 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 UBTD1Q9HAC8 227 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 TPT1P8Q9HAU6 139 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 CTPS2Q9NRF8 586 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 SLC6A13Q9NSD5 602 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 CALML5Q9NZT1 146 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 KLHL9Q9P2J3 617 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 KLHL13Q9P2N7 655 aa11.32□□□□□ -0.6
SGCE-203ENST00000425444 NOTCH1P46531 2555 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 AGAP5A6NIR3 686 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 NR5A2O00482 541 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 DNAJA2O60884 412 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 TP53P04637 393 aaPredicted RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 DBIP07108 87 aaKnown RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 ZCCHC18P0CG32 403 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 UQCRBP14927 111 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 FPR1P21462 350 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 IDH2P48735 452 aaKnown RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 IDH3AP50213 366 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 CRISP3P54108 245 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 RAC3P60763 192 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 DSTNP60981 165 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 CSNK2A1P68400 391 aaPredicted RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 RUNX1T1Q06455 604 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 MRPL2Q5T653 305 aaKnown RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 SLC2A7Q6PXP3 512 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 TUSC5Q8IXB3 177 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 CNOT9Q92600 299 aaKnown RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 AURKBQ96GD4 344 aaPredicted RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 EBF4Q9BQW3 602 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 TACO1Q9BSH4 297 aaKnown RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 CCDC28BQ9BUN5 200 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 MTHFD2LQ9H903 347 aaPredicted RBP11.31□□□□□ -0.6
SGCE-203ENST00000425444 VIPAS39Q9H9C1 493 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 GP6Q9HCN6 339 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 CHRNA9Q9UGM1 479 aa11.31□□□□□ -0.6
SGCE-203ENST00000425444 HEATR5AQ86XA9 2040 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 SULT2B1O00204 365 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 AP3D1O14617 1153 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 FESP07332 822 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 H2AFXP16104 143 aaPredicted RBP11.3□□□□□ -0.6
SGCE-203ENST00000425444 PPP3CBP16298 524 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 CCNA2P20248 432 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 CRYGSP22914 178 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 HTR3AP46098 478 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 PTH2RP49190 550 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 DIO1P49895 249 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 PLAURQ03405 335 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 ACKR1Q16570 336 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 KRTAP24-1Q3LI83 254 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 TFAP2EQ6VUC0 442 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 NUFIP2Q7Z417 695 aaKnown RBP11.3□□□□□ -0.6
SGCE-203ENST00000425444 GTF2H4Q92759 462 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 ZHX1-C8orf76Q96EF9 292 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 DNAJA3Q96EY1 480 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 TMEM19Q96HH6 336 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 CCDC106Q9BWC9 280 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 GSX2Q9BZM3 304 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 RAD21L1Q9H4I0 556 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 THUMPD1Q9NXG2 353 aaKnown RBP11.3□□□□□ -0.6
SGCE-203ENST00000425444 CCDC167Q9P0B6 97 aa11.3□□□□□ -0.6
SGCE-203ENST00000425444 CFAP73A6NFT4 308 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms