RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 H3BN98 237 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 HTR1AP08908 422 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 PCMT1P22061 227 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 POU1F1P28069 291 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 NRG3P56975 720 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 FBXW4P57775 412 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 EMX1Q04741 257 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-202ENST00000425436 NFATC3Q12968 1075 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 TSPAN31Q12999 210 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF791Q3KP31 576 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-202ENST00000425436 FLYWCH1Q4VC44 716 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 GRAMD2AQ8IUY3 354 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 CMIPQ8IY22 773 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 CYP4Z2PQ8N1L4 340 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 SLC15A4Q8N697 577 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 TEX19Q8NA77 164 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 OR8J1Q8NGP2 316 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 RAB2BQ8WUD1 216 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 OMA1Q96E52 524 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 HSPBAP1Q96EW2 488 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 SLC41A3Q96GZ6 507 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 COPS4Q9BT78 406 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 KLHL1Q9NR64 748 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 PAK1IP1Q9NWT1 392 aaPredicted RBP14.26□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF226Q9NYT6 803 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 ERVK-18Q9QC07 812 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 TESQ9UGI8 421 aaKnown RBP14.26□□□□□ -0.13
SHOX2-202ENST00000425436 PCDHGA10Q9Y5H3 936 aa14.26□□□□□ -0.13
SHOX2-202ENST00000425436 SPENQ96T58 3664 aaKnown RBP14.26□□□□□ -0.13
SHOX2-202ENST00000425436 A0A087WUU8 490 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 TRAPPC13A5PLN9 417 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 CPSF4LA6NMK7 179 aaKnown RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 TO15178 435 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 REM1O75628 298 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 PRB1P04280 392 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 FBXO45P0C2W1 286 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 RFX3P48380 749 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 SMSP52788 366 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 PLCXD2Q0VAA5 305 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 SLC25A30Q5SVS4 291 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 CCNJQ5T5M9 372 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 MEDAGQ5VYS4 303 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 SLC6A19Q695T7 634 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 C12orf73Q69YU5 71 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 Q6ZS92 163 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 MDS2Q8NDY4 140 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 OR10G3Q8NGC4 313 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 UBE2FQ969M7 185 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 SPACA9Q96E40 222 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF559Q9BR84 538 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 HOXD1Q9GZZ0 328 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 FKBP14Q9NWM8 211 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 MRTO4Q9UKD2 239 aaKnown RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 B3GNT3Q9Y2A9 372 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 EXPH5Q8NEV8 1989 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 TPST2O60704 377 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 LCN1P31025 176 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 GIPRP48546 466 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 GSSP48637 474 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 FOXD4Q12950 439 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF169Q14929 603 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF141Q15928 474 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 MRPL2Q5T653 305 aaKnown RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 SYT6Q5T7P8 510 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 GPR107Q5VW38 600 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 FIGNL1Q6PIW4 674 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 Q6ZPB1 254 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 RASSF6Q6ZTQ3 369 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 MBOAT2Q6ZWT7 520 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 GDF7Q7Z4P5 450 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 HMGN2P46Q86SG4 172 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 SLC34A3Q8N130 599 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 EFHD2Q96C19 240 aaPredicted RBP14.25□□□□□ -0.13
SHOX2-202ENST00000425436 HS6ST2Q96MM7 605 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 ADOQ96SZ5 270 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 TMEM27Q9HBJ8 222 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 CBLCQ9ULV8 474 aa14.25□□□□□ -0.13
SHOX2-202ENST00000425436 NINQ8N4C6 2090 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 TRAV17A0A0B4J275 112 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SNTNA6NMZ2 147 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 G3V3Y1 287 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 PPM1BO75688 479 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SLC25A12O75746 678 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 CDK1P06493 297 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SP1P08047 785 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 PIPP12273 146 aaPredicted RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 CD46P15529 392 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 FUT4P22083 530 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 FPR3P25089 353 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 KLRB1Q12918 225 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 DYNC1I2Q13409 638 aaKnown RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 MAPK14Q16539 360 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 OCLNQ16625 522 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SMN1Q16637 294 aaKnown RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SOWAHCQ53LP3 525 aaPredicted RBP14.24□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF766Q5HY98 468 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 TMEM201Q5SNT2 666 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 SLC25A25Q6KCM7 469 aa14.24□□□□□ -0.13
SHOX2-202ENST00000425436 ZNF613Q6PF04 617 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms