RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 AP3D1O14617 1153 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 CASKO14936 926 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 SERPINB7O75635 380 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 PGM3O95394 542 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 AVPP01185 164 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 GKN3PP0CG01 181 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 EPXP11678 715 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 POU2F1P14859 743 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 GPX2P18283 190 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 CCNA2P20248 432 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 CXCR1P25024 350 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 TACR3P29371 465 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 CD79BP40259 229 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 CYLC2Q14093 348 aaPredicted RBP9.78□□□□□ -0.84
USP49-204ENST00000423567 SCARB2Q14108 478 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 GUSBP1Q15486 140 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 FBXW10Q5XX13 1052 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 WBP2NLQ6ICG8 309 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 DLEU7Q6UYE1 221 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 TMPPEQ6ZT21 453 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 CADM2Q8N3J6 435 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 C11orf65Q8NCR3 313 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 BHLHE22Q8NFJ8 381 aaPredicted RBP9.78□□□□□ -0.84
USP49-204ENST00000423567 NFKBIDQ8NI38 313 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 LINC01560Q8TB33 94 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 RNF128Q8TEB7 428 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 ABHD3Q8WU67 409 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 SLC35B4Q969S0 331 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 ZNF524Q96C55 264 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 ANKRD27Q96NW4 1050 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 SH3GL1Q99961 368 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 SRXN1Q9BYN0 137 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 TMEM38AQ9H6F2 299 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 RLIMQ9NVW2 624 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 KLHL9Q9P2J3 617 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 TMED7Q9Y3B3 224 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 HDGFL3Q9Y3E1 203 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 PKDREJQ9NTG1 2253 aa9.78□□□□□ -0.84
USP49-204ENST00000423567 KIAA1549Q9HCM3 1950 aa9.77□□□□□ -0.84
USP49-204ENST00000423567 MAST4O15021 2626 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 PRORSD1PA6NEY8 169 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 BBIP1A8MTZ0 92 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 ZNF208O43345 1280 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CGAP01215 116 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CD1EP15812 388 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 AGTR1P30556 359 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 ADSLP30566 484 aaPredicted RBP9.77□□□□□ -0.85
USP49-204ENST00000423567 PRKAR1BP31321 381 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 PCYT1AP49585 367 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 DIO1P49895 249 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 PLAURQ03405 335 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 RBBP4Q09028 425 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 KLF10Q13118 480 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 EXOC3L2Q2M3D2 409 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 TRMT5Q32P41 509 aaKnown RBP9.77□□□□□ -0.85
USP49-204ENST00000423567 COQ5Q5HYK3 327 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CGB2Q6NT52 195 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 BEND4Q6ZU67 534 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 ADGRG3Q86Y34 549 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 SLC30A8Q8IWU4 369 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CLIP4Q8N3C7 705 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 ZNF610Q8N9Z0 462 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 PCYOX1LQ8NBM8 494 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 HIPK4Q8NE63 616 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 DACH2Q96NX9 599 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CPPED1Q9BRF8 314 aaPredicted RBP9.77□□□□□ -0.85
USP49-204ENST00000423567 C12orf49Q9H741 205 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 SAR1AQ9NR31 198 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 PLSCR4Q9NRQ2 329 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 KLHL28Q9NXS3 571 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 KLHL13Q9P2N7 655 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 RPS6KB2Q9UBS0 482 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 OSGIN1Q9UJX0 560 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CAPN7Q9Y6W3 813 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 CENPEQ02224 2701 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 DOCK7Q96N67 2140 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 NAV2Q8IVL1 2488 aa9.77□□□□□ -0.85
USP49-204ENST00000423567 INTS1Q8N201 2190 aaKnown RBP9.77□□□□□ -0.85
USP49-204ENST00000423567 IGHV3-15A0A0B4J1V0 119 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 SH3D21A4FU49 640 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 A6NNC1 897 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 C16orf97H3BN30 126 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 SLC22A2O15244 555 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 ST8SIA5O15466 376 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 DNPH1O43598 174 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 CCDC22O60826 627 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 ADAM11O75078 769 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 GOSR1O95249 250 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 PMS2P2O95744 297 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 NPPAP01160 153 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 FESP07332 822 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 YES1P07947 543 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 OR2B6P58173 313 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 MTPNP58546 118 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 NCALDP61601 193 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 SLC35A1P78382 337 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 FAM27E3Q08E93 113 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 RASGEF1BQ0VAM2 473 aa9.76□□□□□ -0.85
USP49-204ENST00000423567 CAPRIN1Q14444 709 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms