RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 FAIMQ9NVQ4 179 aa10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 AIG1Q9NVV5 245 aa10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 LIPT1Q9Y234 373 aa10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 V9GYY5 206 aaPredicted RBP10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 CADP27708 2225 aa10.22□□□□□ -0.77
SQSTM1-203ENST00000422245 AGAP5A6NIR3 686 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 OR5H1A6NKK0 313 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 HMGN4O00479 90 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 PGM3O95394 542 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 UQCRBP14927 111 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 IGHV1-2P23083 117 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 EDNRAP25101 427 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 PCSK6P29122 969 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 MAGEA8P43361 318 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 SLC16A1P53985 500 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 PLAURQ03405 335 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 CHRNEQ04844 493 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 BST1Q10588 318 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 VEZF1Q14119 521 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 GNA13Q14344 377 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 CLEC12BQ2HXU8 276 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 TNFAIP8L3Q5GJ75 292 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 FBXW9Q5XUX1 488 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 SPATA19Q7Z5L4 167 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 ATG4DQ86TL0 474 aaPredicted RBP10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 RNF130Q86XS8 419 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 PANX1Q96RD7 426 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 PARD6BQ9BYG5 372 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 ALG2Q9H553 416 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 KCNK9Q9NPC2 374 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 MALT1Q9UDY8 824 aa10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 NOSIPQ9Y314 301 aaKnown RBP10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 MAGED1Q9Y5V3 778 aaPredicted RBP10.21□□□□□ -0.77
SQSTM1-203ENST00000422245 GOLGA8QA0A0J9YX86 632 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 PRAMEF27A3QJZ7 478 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 GOLGA8OA6NCC3 632 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 DPRXA6NFQ7 191 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 CCDC154A6NI56 674 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 TRPC5OSA6NMA1 111 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF716A6NP11 495 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 C9JVG2 144 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 GOLGA8NF8WBI6 632 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 FAAHO00519 579 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 SDHDO14521 159 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF208O43345 1280 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 PGRP06401 933 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 CHRM4P08173 479 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ALDOCP09972 364 aaKnown RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 POLR2HP52434 150 aaKnown RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 MAP2K6P52564 334 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 CDH11P55287 796 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 NME5P56597 212 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 TNK1Q13470 666 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 MPP2Q14168 576 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 PGGHGQ32M88 737 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 HHATQ5VTY9 493 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 LRRC74BQ6ZQY2 392 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 DTX2Q86UW9 622 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 UBE2J2Q8N2K1 259 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF433Q8N7K0 673 aaPredicted RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ANKFN1Q8N957 763 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 GLB1L3Q8NCI6 653 aaPredicted RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 WDR60Q8WVS4 1066 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 PMM1Q92871 262 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 NEUROG1Q92886 237 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ZNF775Q96BV0 537 aaPredicted RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 DDIT4LQ96D03 193 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 RADILQ96JH8 1075 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 ARL5BQ96KC2 179 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 TRAF4Q9BUZ4 470 aaPredicted RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 GRIP2Q9C0E4 1043 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 OR11A1Q9GZK7 315 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 SLC38A1Q9H2H9 487 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 BARX1Q9HBU1 254 aaPredicted RBP10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 PNPOQ9NVS9 261 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 RAB21Q9UL25 225 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 TRAPPC4Q9Y296 219 aa10.2□□□□□ -0.78
SQSTM1-203ENST00000422245 PLCE1Q9P212 2302 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 TMED7-TICAM2A0A0A6YYA0 188 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 CLDN24A6NM45 220 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 SHISA9B4DS77 424 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 INAFM1C9JVW0 142 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ABCD4O14678 606 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 HDAC3O15379 428 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 EIF1BO60739 113 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 ADAM11O75078 769 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 MRPL33O75394 65 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 RAD51DO75771 328 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 KRT75O95678 551 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 IGHV3-9P01782 118 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 DBIP07108 87 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 RPS4Y1P22090 263 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 IDUAP35475 653 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 CDKN1AP38936 164 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 IDH2P48735 452 aaKnown RBP10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 OR2B6P58173 313 aa10.19□□□□□ -0.78
SQSTM1-203ENST00000422245 UFM1P61960 85 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms