RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SMAD5Q99717 465 aaKnown RBP12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 TOR3AQ9H497 397 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 MEPEQ9NQ76 525 aaPredicted RBP12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 CTPS2Q9NRF8 586 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 MED17Q9NVC6 651 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 FAM118AQ9NWS6 357 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 REV1Q9UBZ9 1251 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 OSGIN1Q9UJX0 560 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 NDRG4Q9ULP0 352 aaKnown RBP12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 PCDHGB7Q9Y5F8 929 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 PCDHGA9Q9Y5G4 932 aaKnown RBP12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 AP4B1Q9Y6B7 739 aa12.95□□□□□ -0.34
SHMT1P1-201ENST00000419974 K7ENP7 123 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 ERVH48-1M5A8F1 160 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 WDPCPO95876 746 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 GP1BBP13224 206 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 CLK1P49759 484 aaKnown RBP12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 DSCR4P56555 118 aaPredicted RBP12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 KCNAB2Q13303 367 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 PLPPR5Q32ZL2 321 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 BICRALQ6AI39 1079 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 RPL13AP3Q6NVV1 102 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 INO80CQ6PI98 192 aaPredicted RBP12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 KLHL17Q6TDP4 642 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 PRICKLE2Q7Z3G6 844 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 CHERPQ8IWX8 916 aaKnown RBP12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 NRMQ8IXM6 262 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 CADM2Q8N3J6 435 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 SCMH1Q96GD3 660 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 SH3YL1Q96HL8 342 aaPredicted RBP12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 FAM173AQ9BQD7 235 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 WDR70Q9NW82 654 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 IL20Q9NYY1 176 aa12.94□□□□□ -0.34
SHMT1P1-201ENST00000419974 IGKV1D-42A0A075B6H8 117 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 LOC100130705A0A1B0GUX0 176 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ELOA3DA6NLF2 546 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 SLC25A12O75746 678 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 TP53P04637 393 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 TSPAN19P0C672 248 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 PRKAR1AP10644 381 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF17P17021 662 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 MYF6P23409 242 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ELK4P28324 431 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 TACR3P29371 465 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 SLC9A3P48764 834 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 RNF144AP50876 292 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 CCR4P51679 360 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF41P51814 821 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 FOXO1Q12778 655 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 MED21Q13503 144 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR1C1Q15619 314 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 TOMM34Q15785 309 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ELOA3BQ3SY89 546 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ADGRG3Q86Y34 549 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 GTPBP8Q8N3Z3 284 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 ELOA3Q8NG57 546 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR1J4Q8NGS1 313 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 BPIFA2Q96DR5 249 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 GPA33Q99795 319 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 KLHDC3Q9BQ90 382 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 POTEKPQ9BYX7 375 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 UBQLN3Q9H347 655 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 DSN1Q9H410 356 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 MED11Q9P086 117 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 KLF13Q9Y2Y9 288 aaPredicted RBP12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 CPAMD8Q8IZJ3 1885 aa12.93□□□□□ -0.34
SHMT1P1-201ENST00000419974 FASNP49327 2511 aaKnown RBP12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 EIF4E1BA6NMX2 242 aaKnown RBP12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZAR1LA6NP61 321 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 A8MVM7 634 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 LINC01387J3KSC0 135 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 NME2P1O60361 137 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 PTP4A3O75365 173 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 SP1P08047 785 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 NME2P22392 152 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 CXCR1P25024 350 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 SRD5A2P31213 254 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 CRISP1P54107 249 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 LSM11P83369 360 aaKnown RBP eCLIP12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 OC90Q02509 493 aaPredicted RBP12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 TEKQ02763 1124 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 EGR4Q05215 589 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 ATMQ13315 3056 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 TAF11Q15544 211 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 ANKRD34AQ69YU3 496 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 CCDC81Q6ZN84 652 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZNF555Q8NEP9 628 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 FDCSPQ8NFU4 85 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 OR4K17Q8NGC6 315 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 FBLIM1Q8WUP2 373 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 SLC25A43Q8WUT9 341 aaPredicted RBP12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 SIGLEC12Q96PQ1 595 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 NR1H4Q96RI1 486 aaPredicted RBP12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 ZFP64Q9NPA5 681 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 QPCTLQ9NXS2 382 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 FBXL2Q9UKC9 423 aa12.92□□□□□ -0.34
SHMT1P1-201ENST00000419974 BOKQ9UMX3 212 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms