RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 HMG20AQ9NP66 347 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 FSCN3Q9NQT6 498 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 CHCHD3Q9NX63 227 aaKnown RBP8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 ERVK13-1Q9NX77 482 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 KLHL21Q9UJP4 597 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 CARD8Q9Y2G2 431 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 CAB39Q9Y376 341 aaPredicted RBP8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 SF3B6Q9Y3B4 125 aaKnown RBP8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 ZNF337Q9Y3M9 751 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 PCDHGB6Q9Y5F9 930 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
LINCMD1-201ENST00000418518 A0A075B6Q4 140 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 RIIAD1A6NNX1 92 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PATE3B3GLJ2 98 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PRR23D1E9PI22 279 aaPredicted RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ZNF670-ZNF695F2Z2N8 137 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 CDC40O60508 579 aaKnown RBP eCLIP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 REM1O75628 298 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PPP1R3DO95685 299 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PRR23D2P0DMB1 279 aaPredicted RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 HPGDP15428 266 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ZNF3P17036 446 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PSMA1P25786 263 aaKnown RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ABCD3P28288 659 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 IL12BP29460 328 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 IDUAP35475 653 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ETV6P41212 452 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 SOX3P41225 446 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 CAPZA2P47755 286 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 NR0B1P51843 470 aaKnown RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 RAB15P59190 212 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PRPS1P60891 318 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 RNF4P78317 190 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 POU4F2Q12837 409 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ITGADQ13349 1161 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 GPR50Q13585 617 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 EFR3AQ14156 821 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 GGTLC2Q14390 218 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 TRIM61Q5EBN2 209 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 MRPL14Q6P1L8 145 aaKnown RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PLBD1Q6P4A8 553 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 TUBA3EQ6PEY2 450 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 CBLN3Q6UW01 205 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 DPY19L2P2Q6ZN68 376 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 DBX2Q6ZNG2 339 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 IGFN1Q86VF2 1251 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PPP1R3BQ86XI6 285 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 MISPQ8IVT2 679 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 KLHL36Q8N4N3 616 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 SIRT6Q8N6T7 355 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 LRRC75AQ8NAA5 344 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 SLC37A3Q8NCC5 494 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 OR4F15Q8NGB8 312 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 MCFD2Q8NI22 146 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 FNDC8Q8TC99 324 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 PTP4A1Q93096 173 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 GAL3ST4Q96RP7 486 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 ADOQ96SZ5 270 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 COQ7Q99807 217 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 HCAR1Q9BXC0 346 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 NMNAT2Q9BZQ4 307 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 WDR54Q9H977 334 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 NRIP3Q9NQ35 241 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 H2AFY2Q9P0M6 372 aaPredicted RBP8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 TNFRSF10DQ9UBN6 386 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 IL20RAQ9UHF4 553 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 HIF3AQ9Y2N7 669 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 SLC6A5Q9Y345 797 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 CORINQ9Y5Q5 1042 aa8.27□□□□□ -1.09
LINCMD1-201ENST00000418518 LOC100506127A0A0U1RQW1 187 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 TMEM221A6NGB7 291 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 MCIDASD6RGH6 385 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 M0R296 226 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 GTPBP1O00178 669 aaKnown RBP8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 TAF4O00268 1085 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 IMPA2O14732 288 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 AKAP8O43823 692 aaKnown RBP8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 PRKNO60260 465 aaPredicted RBP8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 FZD7O75084 574 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 CPNE3O75131 537 aaKnown RBP8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 TXNDC12O95881 172 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 GP1BAP07359 652 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 HEXBP07686 556 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 ASAH2BP0C7U1 165 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 BMP4P12644 408 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 ZNF12P17014 697 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 NAGAP17050 411 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 CD53P19397 219 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 PGCP20142 388 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 PAICSP22234 425 aaKnown RBP8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 GALP22466 123 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 FGF9P31371 208 aaPredicted RBP8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 GABRA5P31644 462 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 UQCRC1P31930 480 aa8.26□□□□□ -1.09
LINCMD1-201ENST00000418518 EVI2BP34910 448 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms