RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 AIM2O14862 343 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 NUDT14O95848 222 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 PLAUP00749 431 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 CSTAP01040 98 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 TP53P04637 393 aaPredicted RBP16.04■□□□□ 0.16
VCP-202ENST00000417448 UBL4AP11441 157 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 GPX2P18283 190 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 IL11P20809 199 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 TPD52P55327 224 aaPredicted RBP16.04■□□□□ 0.16
VCP-202ENST00000417448 GFRA1P56159 465 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 FGFBP1Q14512 234 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 ADRM1Q16186 407 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 LRRC58Q96CX6 371 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 OPN3Q9H1Y3 402 aaPredicted RBP16.04■□□□□ 0.16
VCP-202ENST00000417448 RAD21L1Q9H4I0 556 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 MTHFD2LQ9H903 347 aaPredicted RBP16.04■□□□□ 0.16
VCP-202ENST00000417448 A4GALTQ9NPC4 353 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 POLE3Q9NRF9 147 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 MED17Q9NVC6 651 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 RLIMQ9NVW2 624 aa16.04■□□□□ 0.16
VCP-202ENST00000417448 OR2M5A3KFT3 312 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 AGAP5A6NIR3 686 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 ZNF264O43296 627 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 ARAFP10398 606 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 BMP2P12643 396 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 AQP1P29972 269 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 RYKP34925 604 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 FADDQ13158 208 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 MAPRE2Q15555 327 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 TRMT5Q32P41 509 aaKnown RBP16.03■□□□□ 0.16
VCP-202ENST00000417448 BTLAQ7Z6A9 289 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
VCP-202ENST00000417448 PTOV1Q86YD1 416 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 GRAMD2AQ8IUY3 354 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 UBQLNLQ8IYU4 475 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 OR52P1PQ8NH57 321 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 OR10A6Q8NH74 314 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 POC1BQ8TC44 478 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 GPR119Q8TDV5 335 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 ICAM5Q9UMF0 924 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 ARL2BPQ9Y2Y0 163 aa16.03■□□□□ 0.16
VCP-202ENST00000417448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 C5orf58C9J3I9 102 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 H3BML4 177 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 ADAM11O75078 769 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 THBDP07204 575 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 FAM157CP0CG43 387 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 POU2F1P14859 743 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 IL7RP16871 459 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 PPIBP23284 216 aaKnown RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 PGM1P36871 562 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 LHX2P50458 406 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 P2RX1P51575 399 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 CRISP3P54108 245 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 KCNJ10P78508 379 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 TXNL4AP83876 142 aaKnown RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 CDK6Q00534 326 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 SKP2Q13309 424 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 PLPPR5Q32ZL2 321 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 ANKRD34AQ69YU3 496 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 ZNF836Q6ZNA1 936 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 ZNF704Q6ZNC4 412 aaPredicted RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 EIF3MQ7L2H7 374 aaKnown RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 MISPQ8IVT2 679 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 CLIP4Q8N3C7 705 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 CNEP1R1Q8N9A8 125 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 RP9Q8TA86 221 aaKnown RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 WDR60Q8WVS4 1066 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 RNF145Q96MT1 663 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 LAT2Q9GZY6 243 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 TMEM185BQ9H7F4 350 aa16.02■□□□□ 0.16
VCP-202ENST00000417448 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 MRPS18CQ9Y3D5 142 aaKnown RBP16.02■□□□□ 0.16
VCP-202ENST00000417448 YLPM1P49750 1951 aaKnown RBP16.02■□□□□ 0.15
VCP-202ENST00000417448 TMEM247A6NEH6 219 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 AP3D1O14617 1153 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 SLC22A2O15244 555 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 KLF4O43474 513 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 EFNA2O43921 213 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 SHOX2O60902 331 aaPredicted RBP16.01■□□□□ 0.15
VCP-202ENST00000417448 PGM3O95394 542 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 GUSBP08236 651 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 GKN3PP0CG01 181 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 RPS4Y1P22090 263 aaKnown RBP16.01■□□□□ 0.15
VCP-202ENST00000417448 CHMP24386 653 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 MAGEA8P43361 318 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 ZNF41P51814 821 aaPredicted RBP16.01■□□□□ 0.15
VCP-202ENST00000417448 SUCLG1P53597 346 aaKnown RBP16.01■□□□□ 0.15
VCP-202ENST00000417448 CLDN18P56856 261 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 EEF1A1P68104 462 aaKnown RBP16.01■□□□□ 0.15
VCP-202ENST00000417448 FOXF1Q12946 379 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 SCARB2Q14108 478 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 CYP51A1Q16850 503 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 MRPL2Q5T653 305 aaKnown RBP16.01■□□□□ 0.15
VCP-202ENST00000417448 EEF1A1P5Q5VTE0 462 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 AP1ARQ63HQ0 302 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 ATP6V1C2Q8NEY4 427 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 FBXO27Q8NI29 283 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 C19orf24Q9BVV8 132 aa16.01■□□□□ 0.15
VCP-202ENST00000417448 KAT8Q9H7Z6 458 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms