RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 LTBQ06643 244 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 TAB1Q15750 504 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 SYPL1Q16563 259 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 ALKBH2Q6NS38 261 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 LRRC74BQ6ZQY2 392 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 GRINAQ7Z429 371 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 MAVSQ7Z434 540 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 ANKFN1Q8N957 763 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 PNPT1Q8TCS8 783 aaKnown RBP22.46■■□□□ 1.19
VEGFA-208ENST00000417285 SMR3AQ99954 134 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 RMND5AQ9H871 391 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 SDR39U1Q9NRG7 319 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-208ENST00000417285 ZNF701Q9NV72 531 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-208ENST00000417285 CHRNA9Q9UGM1 479 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 PRDM4Q9UKN5 801 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 HDGFL3Q9Y3E1 203 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 HEATR5AQ86XA9 2040 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 ABCA2Q9BZC7 2435 aa22.46■■□□□ 1.19
VEGFA-208ENST00000417285 ZANQ9Y493 2812 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 DNPH1O43598 174 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 NR2F1P10589 423 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 RYKP34925 604 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 GNA13Q14344 377 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 CAPRIN1Q14444 709 aaKnown RBP22.45■■□□□ 1.18
VEGFA-208ENST00000417285 NCMAPQ5T1S8 102 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 MSANTD1Q6ZTZ1 278 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 BHLHA15Q7RTS1 189 aaPredicted RBP22.45■■□□□ 1.18
VEGFA-208ENST00000417285 HMGN2P46Q86SG4 172 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 ZNF100Q8IYN0 542 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 AKAP1Q92667 903 aaKnown RBP eCLIP22.45■■□□□ 1.18
VEGFA-208ENST00000417285 COX4I2Q96KJ9 171 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 OR52B2Q96RD2 323 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 POTEKPQ9BYX7 375 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 SLC38A1Q9H2H9 487 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 RNF115Q9Y4L5 304 aa22.45■■□□□ 1.18
VEGFA-208ENST00000417285 BCAS1O75363 584 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-208ENST00000417285 ANP32DO95626 131 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 FESP07332 822 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 CD3EP07766 207 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 CHRM4P08173 479 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 TSC22D1Q15714 1073 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 COX20Q5RI15 118 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 DNAJC14Q6Y2X3 702 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-208ENST00000417285 P2RY8Q86VZ1 359 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 MIER2Q8N344 545 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 ZNF775Q96BV0 537 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-208ENST00000417285 CTPS2Q9NRF8 586 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 TRAPPC4Q9Y296 219 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 USH1CQ9Y6N9 552 aa22.44■■□□□ 1.18
VEGFA-208ENST00000417285 IGKV3D-15A0A087WSY6 115 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 AGAP5A6NIR3 686 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 CLDN24A6NM45 220 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 H7C1Q1 480 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 GPR171O14626 319 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 PMS2P2O95744 297 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 HEXAP06865 529 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 ZCCHC18P0CG32 403 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 MAP2K6P52564 334 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 ADGRG3Q86Y34 549 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 WDR60Q8WVS4 1066 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 MUCL1Q96DR8 90 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 ITCHQ96J02 903 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 C7orf26Q96N11 449 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 P2RX2Q9UBL9 471 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 PRR14LQ5THK1 2151 aa22.43■■□□□ 1.18
VEGFA-208ENST00000417285 TLN2Q9Y4G6 2542 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 IL7RP16871 459 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 IDH2P48735 452 aaKnown RBP22.42■■□□□ 1.18
VEGFA-208ENST00000417285 POLR2JP52435 117 aaKnown RBP22.42■■□□□ 1.18
VEGFA-208ENST00000417285 PIGXQ8TBF5 258 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 LRRC8CQ8TDW0 803 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 CNOT9Q92600 299 aaKnown RBP22.42■■□□□ 1.18
VEGFA-208ENST00000417285 ZNF300Q96RE9 604 aaPredicted RBP22.42■■□□□ 1.18
VEGFA-208ENST00000417285 CALML5Q9NZT1 146 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 PRSS50Q9UI38 385 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 FREM1Q5H8C1 2179 aa22.42■■□□□ 1.18
VEGFA-208ENST00000417285 USF3Q68DE3 2245 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 CLOCKO15516 846 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 DBIP07108 87 aaKnown RBP22.41■■□□□ 1.18
VEGFA-208ENST00000417285 UQCRBP14927 111 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 RPS4Y1P22090 263 aaKnown RBP22.41■■□□□ 1.18
VEGFA-208ENST00000417285 ABLIM2Q6H8Q1 611 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 EPGNQ6UW88 154 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 PEX5LQ8IYB4 626 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 FBXW5Q969U6 566 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 ATP6V1G3Q96LB4 118 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 SLC6A13Q9NSD5 602 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 LAMP3Q9UQV4 416 aa22.41■■□□□ 1.18
VEGFA-208ENST00000417285 RAI1Q7Z5J4 1906 aaPredicted RBP22.41■■□□□ 1.18
VEGFA-208ENST00000417285 FAM234BA2RU67 622 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 FAAHO00519 579 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 ZNF208O43345 1280 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 LYZL6O75951 148 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 TGDSO95455 350 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 LY6G6DO95868 133 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 GGT1P19440 569 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 CRATP43155 626 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 STX1BP61266 288 aa22.4■■□□□ 1.18
VEGFA-208ENST00000417285 RPS4XP62701 263 aaKnown RBP22.4■■□□□ 1.18
VEGFA-208ENST00000417285 PLAURQ03405 335 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms