RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 MAMDC2Q7Z304 686 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 GTF2IRD2Q86UP8 949 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 RANBP3LQ86VV4 465 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 PGAM4Q8N0Y7 254 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 OR52E4Q8NGH9 312 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 CPNE4Q96A23 557 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 TAMM41Q96BW9 452 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 DDIT4LQ96D03 193 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 OR5B2Q96R09 309 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 KCTD14Q9BQ13 255 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 RSPO3Q9BXY4 272 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 TMEM181Q9P2C4 612 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 TESQ9UGI8 421 aaKnown RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 BAG5Q9UL15 447 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 USP22Q9UPT9 525 aa20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 KLF2Q9Y5W3 355 aaPredicted RBP20.73■□□□□ 0.91
SMARCB1-205ENST00000417137 DIDO1Q9BTC0 2240 aaKnown RBP20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 TGM6O95932 706 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 CRHP06850 196 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 CCNA2P20248 432 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 SHC1P29353 583 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 OPRM1P35372 400 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 GSK3BP49841 420 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 RAC3P60763 192 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 HOXC5Q00444 222 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 LSMEM1Q8N8F7 131 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 FNDC9Q8TBE3 224 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 FIG4Q92562 907 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 PROX1Q92786 737 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 TMEM27Q9HBJ8 222 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 KCNJ16Q9NPI9 418 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 SELENONQ9NZV5 590 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 HDGFL3Q9Y3E1 203 aa20.72■□□□□ 0.91
SMARCB1-205ENST00000417137 A1L4Q6 167 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 GMNNO75496 209 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 IL18BPO95998 194 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 FESP07332 822 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 CD247P20963 164 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 CALB2P22676 271 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 ZNF136P52737 540 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 CSNK2A1P68400 391 aaPredicted RBP20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 SLC25A35Q3KQZ1 300 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 TMPPEQ6ZT21 453 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 GPR32P1Q8NGA4 272 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 DNAJA4Q8WW22 397 aaPredicted RBP20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 INTS12Q96CB8 462 aaKnown RBP20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 SLC9A8Q9Y2E8 581 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 HEATR5AQ86XA9 2040 aa20.71■□□□□ 0.91
SMARCB1-205ENST00000417137 PHF3Q92576 2039 aaKnown RBP20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 A0A1W2PNR3 127 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 B2RBV5 119 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 SULT2B1O00204 365 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 FMO6PO60774 539 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 SLC25A3Q00325 362 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 NRF1Q16656 503 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 LRRC23Q53EV4 343 aaPredicted RBP20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 PLXDC2Q6UX71 529 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 TRPM8Q7Z2W7 1104 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 COMTD1Q86VU5 262 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 LURAP1LQ8IV03 231 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 MCEMP1Q8IX19 187 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 NAXEQ8NCW5 288 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 LZICQ8WZA0 190 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 C3orf49Q96BT1 292 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 ARHGDIGQ99819 225 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 SFXN3Q9BWM7 321 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 RNF122Q9H9V4 155 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 C12orf10Q9HB07 376 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 GLRX2Q9NS18 164 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 ADPRHL2Q9NX46 363 aa20.7■□□□□ 0.9
SMARCB1-205ENST00000417137 TMEM72A0PK05 275 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 CXCR6O00574 342 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 CLDN1O95832 211 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 PNMTP11086 282 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 BMP5P22003 454 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 HTR1EP28566 365 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 CYBRD1Q53TN4 286 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 SAMD4BQ5PRF9 694 aaKnown RBP20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 ULK3Q6PHR2 472 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 ZHX1-C8orf76Q96EF9 292 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 CDRT15Q96T59 188 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 MCHR1Q99705 422 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 POTEKPQ9BYX7 375 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 COQ10BQ9H8M1 238 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 CHST11Q9NPF2 352 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 PLEKHB1Q9UF11 243 aaPredicted RBP20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 TRAPPC4Q9Y296 219 aa20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 USP9XQ93008 2570 aaPredicted RBP20.69■□□□□ 0.9
SMARCB1-205ENST00000417137 ELOA3DA6NLF2 546 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 FAM90A27PA6NNH2 459 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 A8MVM7 634 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 PRSS44E7EML9 344 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 M0R3H8 397 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 AQP8O94778 261 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 PMS2P2O95744 297 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 PLGP00747 810 aaPredicted RBP20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 DIO1P49895 249 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 CRYBA2P53672 197 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 SELENOWP63302 87 aa20.68■□□□□ 0.9
SMARCB1-205ENST00000417137 OR1Q1Q15612 314 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms