RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 MEPEQ9NQ76 525 aaPredicted RBP12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 TBC1D23Q9NUY8 699 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 MED17Q9NVC6 651 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ANKRD10Q9NXR5 420 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 IL20Q9NYY1 176 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 MYRFQ9Y2G1 1151 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 ZNF337Q9Y3M9 751 aa12.96□□□□□ -0.33
HMGA1P1-201ENST00000415560 DOCK10Q96BY6 2186 aa12.96□□□□□ -0.34
HMGA1P1-201ENST00000415560 EML6Q6ZMW3 1958 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 A6NL46 340 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 KLF4O43474 513 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR2T1O43869 369 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 SOX14O95416 240 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 HMGN1P05114 100 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 FUT1P19526 365 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 CCNA2P20248 432 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 MAKP20794 623 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 ST13P50502 369 aaKnown RBP12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 CCL11P51671 97 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 ISL1P61371 349 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 LSM11P83369 360 aaKnown RBP eCLIP12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 CDK5Q00535 292 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 MFAP5Q13361 173 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 GINS1Q14691 196 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 GLYR1Q49A26 553 aaPredicted RBP12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZBED5Q49AG3 693 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC25A53Q5H9E4 307 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 RBM48Q5RL73 367 aaKnown RBP12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLX4IPQ5VYV7 408 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 TIGD3Q6B0B8 471 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC27A4Q6P1M0 643 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 POMZP3Q6PJE2 187 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 LINC00696Q6ZRV3 163 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 MDGA2Q7Z553 956 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 ADGRG3Q86Y34 549 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 P3H2Q8IVL5 708 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 WDSUB1Q8N9V3 476 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 FAM81AQ8TBF8 368 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 GATA6Q92908 595 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 DDIT4LQ96D03 193 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 C1GALT1C1Q96EU7 318 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC38A2Q96QD8 506 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 GPA33Q99795 319 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 FAM173AQ9BQD7 235 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 C20orf141Q9NUB4 165 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 GPR83Q9NYM4 423 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 BOKQ9UMX3 212 aaPredicted RBP12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 VDAC3Q9Y277 283 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 CDH10Q9Y6N8 788 aa12.95□□□□□ -0.34
HMGA1P1-201ENST00000415560 CPAMD8Q8IZJ3 1885 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 TRAV36DV7A0A075B6V5 113 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 E9PQ18 207 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 KLRC4-KLRK1H3BQV0 150 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 ETV2O00321 342 aaPredicted RBP12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF208O43345 1280 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 SUSD5O60279 629 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 TRIM3O75382 744 aaPredicted RBP12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR7A10O76100 309 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 NTN1O95631 604 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 WDPCPO95876 746 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 CH25HO95992 272 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 LYNP07948 512 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 CD46P15529 392 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 HK1P19367 917 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 DPP4P27487 766 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 PRPS1P60891 318 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR1C1Q15619 314 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 DEFB109BQ30KR1 87 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 BROXQ5VW32 411 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 SMARCD3Q6STE5 483 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 PTCHD4Q6ZW05 846 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 ZNF786Q8N393 782 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR6S1Q8NH40 331 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 SNIP1Q8TAD8 396 aaKnown RBP12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 LIPHQ8WWY8 451 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 HAS2Q92819 552 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 NTNG2Q96CW9 530 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 PLEKHA8Q96JA3 519 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 Q96MT0 163 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 TSSK6Q9BXA6 273 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 RNF32Q9H0A6 362 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR52D1Q9H346 318 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 SLC25A19Q9HC21 320 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 NANSQ9NR45 359 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 SCN3BQ9NY72 215 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 CHRNA9Q9UGM1 479 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 DKKL1Q9UK85 242 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 BAIAP2Q9UQB8 552 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 PCNX3Q9H6A9 2034 aa12.94□□□□□ -0.34
HMGA1P1-201ENST00000415560 PTPRZ1P23471 2315 aaPredicted RBP12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 TMEM72A0PK05 275 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 OR5H15A6NDH6 313 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 C17orf51A8MQB3 221 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 CDC42EP2O14613 210 aa12.93□□□□□ -0.34
HMGA1P1-201ENST00000415560 PTP4A3O75365 173 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms