RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 JSRP1Q96MG2 331 aaPredicted RBP12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 RNF145Q96MT1 663 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 ADAM19Q9H013 955 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 ARMC7Q9H6L4 198 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 RPS6KA6Q9UK32 745 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 POMPQ9Y244 141 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 DTX4Q9Y2E6 619 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 IFT52Q9Y366 437 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 WDR45Q9Y484 360 aa12.16□□□□□ -0.46
RAPGEF1-204ENST00000414781 SNPHO15079 494 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 NME6O75414 186 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 REM1O75628 298 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 H6PDO95479 791 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 HPNP05981 417 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 HPGDP15428 266 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 KDELR2P33947 212 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 CLK3P49761 638 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 PLCXD2Q0VAA5 305 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 FLOT2Q14254 428 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 SYPL1Q16563 259 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 BEX5Q5H9J7 111 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 TBCELQ5QJ74 424 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 PRAMEF20Q5VT98 475 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 NPSR1Q6W5P4 371 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF704Q6ZNC4 412 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 NUP54Q7Z3B4 507 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 MEX3DQ86XN8 651 aaKnown RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 PEX5LQ8IYB4 626 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF619Q8N2I2 560 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ANKFN1Q8N957 763 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF527Q8NB42 609 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 FAM156AQ8NDB6 213 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 LZICQ8WZA0 190 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 FIG4Q92562 907 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 DIO2Q92813 273 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 WNT2BQ93097 391 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 FAM162AQ96A26 154 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 TMCO6Q96DC7 493 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 SPACA9Q96E40 222 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 OTUB1Q96FW1 271 aaPredicted RBP12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 PIGQQ9BRB3 760 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 DOHHQ9BU89 302 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 UGT2B28Q9BY64 529 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ZNF350Q9GZX5 532 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 SAP130Q9H0E3 1048 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 UBQLN4Q9NRR5 601 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 ADPRHL2Q9NX46 363 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 EGFL7Q9UHF1 273 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 KCNE3Q9Y6H6 103 aa12.15□□□□□ -0.46
RAPGEF1-204ENST00000414781 KIAA1549Q9HCM3 1950 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 GXYLT2A0PJZ3 443 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 OR6C70A6NIJ9 312 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 AQP12BA6NM10 295 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 M0QX08 132 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 TP53I11O14683 189 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 ACOT8O14734 319 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 HS3ST1O14792 307 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 ZNF354AO60765 605 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 PPM1BO75688 479 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 TRAPPC6AO75865 159 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 ABCD3P28288 659 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 MSX2P35548 267 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 GCKP35557 465 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 FAM27E3Q08E93 113 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 LARS2Q15031 903 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 NNATQ16517 81 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 LCN8Q6JVE9 175 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 FIGNL1Q6PIW4 674 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 AQP12AQ8IXF9 295 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 OR4N2Q8NGD1 307 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 TMBIM1Q969X1 311 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 INTS12Q96CB8 462 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 OMA1Q96E52 524 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 COL21A1Q96P44 957 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 UCN2Q96RP3 112 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 PCDHAC1Q9H158 963 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 SLCO5A1Q9H2Y9 848 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 ELOVL5Q9NYP7 299 aa12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 SAMD4AQ9UPU9 718 aaKnown RBP12.14□□□□□ -0.47
RAPGEF1-204ENST00000414781 CR1P17927 2039 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 PRAMEF27A3QJZ7 478 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 H3BNH8 94 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 ARPC2O15144 300 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 FCMRO60667 390 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 DBIP07108 87 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 UMPSP11172 480 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 CHMP24386 653 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 UGT2B10P36537 528 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 RFX3P48380 749 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 ATP12AP54707 1039 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 PCBP3P57721 371 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 SRSF2Q01130 221 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 MS4A2Q01362 244 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 CHRNEQ04844 493 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 GPR68Q15743 365 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 CCNJQ5T5M9 372 aa12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 TYW3Q6IPR3 259 aaKnown RBP12.13□□□□□ -0.47
RAPGEF1-204ENST00000414781 DNM1P46Q6ZS02 220 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms