RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ULK1O75385 1050 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 STK16O75716 305 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CLDN9O95484 217 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CST1P01037 141 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CGAP01215 116 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CD3EP07766 207 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CD8BP10966 210 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 PCNAP12004 261 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 BCKDHAP12694 445 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 SLC25A16P16260 332 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 EPB42P16452 691 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CCNA2P20248 432 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 PTNP21246 168 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 USF1P22415 310 aaPredicted RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 TCEA1P23193 301 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 CRHBPP24387 322 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 EEF1B2P24534 225 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 S100A3P33764 101 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 STT3AP46977 705 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 TMED10P49755 219 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 RAD23AP54725 363 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CLDN8P56748 225 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 LSM11P83369 360 aaKnown RBP eCLIP6.2□□□□□ -1.42
LSM8-202ENST00000411938 HMGCS1Q01581 520 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 PCDH1Q08174 1060 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 FGFBP1Q14512 234 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ZNF267Q14586 743 aaPredicted RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 DPY19L1Q2PZI1 675 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ZIK1Q3SY52 487 aaPredicted RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 ELOA3BQ3SY89 546 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 GTDC1Q4AE62 458 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 MIDNQ504T8 468 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 HLA-DQA1Q5Y7H0 255 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 TRIM40Q6P9F5 258 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 NXPE4Q6UWF7 544 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 Q6ZNX1 250 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 SMYD1Q8NB12 490 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 SETD9Q8NE22 299 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ELOA3Q8NG57 546 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 GCDHQ92947 438 aaPredicted RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 MUL1Q969V5 352 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ZNF566Q969W8 418 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 TP53INP1Q96A56 240 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 TESCQ96BS2 214 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 CTHRC1Q96CG8 243 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 REXO5Q96IC2 774 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 ITCHQ96J02 903 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 FCRL1Q96LA6 429 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ADAD1Q96M93 576 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 SFXN2Q96NB2 322 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 MUS81Q96NY9 551 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 OR52E6Q96RD3 313 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 BCL7BQ9BQE9 202 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 THUMPD3Q9BV44 507 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 ACPTQ9BZG2 426 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ACTR6Q9GZN1 396 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 NAA50Q9GZZ1 169 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 PAIP1Q9H074 479 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 RYDENQ9NUL5 291 aaKnown RBP6.2□□□□□ -1.42
LSM8-202ENST00000411938 DNAJC11Q9NVH1 559 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 RHBDL2Q9NX52 303 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 TAS2R10Q9NYW0 307 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ERVK-19Q9WJR5 959 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 TMED5Q9Y3A6 229 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 ORC6Q9Y5N6 252 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 SNX5Q9Y5X3 404 aa6.2□□□□□ -1.42
LSM8-202ENST00000411938 C2orf92A0A1B0GVN3 265 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 SERTM1A2A2V5 107 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 SLC1A7O00341 560 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 GNGT2O14610 69 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 FGF17O60258 216 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 SEC22BO75396 215 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 E2F6O75461 281 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 CBR3O75828 277 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 PRKD3O94806 890 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 BCL10O95999 233 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 SERPINA1P01009 418 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 CD8AP01732 235 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 CCDC159P0C7I6 412 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 ZNF708P17019 499 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 SDC1P18827 310 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 EPORP19235 508 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 GGT5P36269 586 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 POLR2IP36954 125 aaKnown RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 SRP14P37108 136 aaKnown RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 MAGEA2P43356 314 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 LHX2P50458 406 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 GZMMP51124 257 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 GFRA1P56159 465 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 CLDN18P56856 261 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 PLIN5Q00G26 463 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 CD47Q08722 323 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 CSTF3Q12996 717 aaKnown RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 EBPQ15125 230 aaKnown RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 CTU2Q2VPK5 515 aaKnown RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 PGGHGQ32M88 737 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 ZNF829Q3KNS6 432 aaPredicted RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 ZNF672Q499Z4 452 aaPredicted RBP6.19□□□□□ -1.42
LSM8-202ENST00000411938 FGD3Q5JSP0 725 aa6.19□□□□□ -1.42
LSM8-202ENST00000411938 PRR31Q5SQ13 230 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms